Os03g0172100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0172100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.14 | 0.651 | 10.4 | -1.13 | 5.43 | -1.07 | 0.0798 | 1.74 | 0.0523 | 21.2 | 20.24 | 1369 | -- | -- |
| 198.73 | 0.657 | 10.4 | -1.3 | 5.39 | -1.03 | 0.255 | -- | 0.0106 | 21.2 | 20 | 1371 | -- | -- |
| 192.06 | 0.645 | 10.4 | -1.13 | 5.44 | -1.07 | -- | 1.8 | 0.0517 | 21.2 | 20.25 | 1359 | -- | -- |
| 198.55 | 0.656 | 10.4 | -1.35 | 5.35 | -0.993 | -- | -- | -0.0275 | 21.1 | 20 | 1379 | -- | -- |
| 1486.14 | 1.81 | 10.3 | -1.44 | -- | -2.28 | -- | 0.0186 | -0.348 | -- | 20.25 | 1359 | -- | -- |
| 234.33 | 0.718 | 10.5 | -1.74 | 5.34 | -- | 0.1 | -- | -0.358 | 21.1 | -- | -- | -- | -- |
| 234.37 | 0.717 | 10.5 | -1.74 | 5.34 | -- | -- | -- | -0.358 | 21.1 | -- | -- | -- | -- |
| 1482.94 | 1.8 | 10.3 | -1.43 | -- | -2.28 | -- | -- | -0.351 | -- | 20 | 1379 | -- | -- |
| 249.43 | 0.736 | 10.4 | -- | 5.41 | -1.21 | -- | -- | 0.11 | 21.1 | 20 | 1379 | -- | -- |
| 1875.28 | 2.02 | 10.3 | -1.73 | -- | -- | -- | -- | -0.389 | -- | -- | -- | -- | -- |
| 314.21 | 0.829 | 10.4 | -- | 5.34 | -- | -- | -- | -0.164 | 21 | -- | -- | -- | -- |
| 1536.45 | 1.83 | 10.3 | -- | -- | -2.34 | -- | -- | -0.193 | -- | 20 | 1379 | -- | -- |
| 1954.18 | 2.06 | 10.3 | -- | -- | -- | -- | -- | -0.197 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 190.62 | radiation | 20 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 45 | 191.62 | radiation | 30 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 47 | 191.79 | radiation | 20 | 1440 | > th | dose independent | sin | 6 | NA |
| 62 | 191.89 | radiation | 30 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 85 | 192.50 | radiation | 30 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 87 | 192.52 | radiation | 30 | 1440 | < th | dose dependent | rect. | 6 | 8 |
| 95 | 192.60 | radiation | 30 | 1440 | < th | dose dependent | rect. | 19 | 19 |
| 169 | 193.41 | radiation | 1 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 171 | 193.43 | radiation | 30 | 1440 | < th | dose dependent | sin | 5 | NA |
| 172 | 193.43 | radiation | 1 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 174 | 193.46 | radiation | 1 | 1440 | > th | dose dependent | rect. | 6 | 7 |
| 259 | 193.87 | radiation | 1 | 1440 | > th | dose dependent | sin | 6 | NA |
| 305 | 194.18 | radiation | 1 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 632 | 195.90 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 634 | 195.91 | radiation | 20 | 1440 | > th | dose independent | no | NA | NA |
| 788 | 196.15 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 836 | 196.40 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 860 | 196.47 | radiation | 20 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 872 | 196.53 | radiation | 20 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 943 | 196.75 | radiation | 30 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 988 | 196.84 | radiation | 30 | 1440 | < th | dose dependent | no | NA | NA |