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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0168600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.67 (0.0458) R2 : 0.242
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.876 (0.113) R2dC : 0.101 R2C : 0.0714
β3 : 1.47 (0.165) R2dE : 0.143 R2E : 0.129
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.213 (0.0988) R2dN8 : 0.0106 R2N8 : 0.0263
σ : 0.854
deviance : 336.34
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_____
C
peak time of C : 2.71
E
wheather : temperature
threshold : 20.68
memory length : 608
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
332.32 0.856 3.62 0.528 0.876 1.3 0.708 1.63 0.344 2.42 20.54 592 -- --
334.28 0.852 3.66 0.179 0.871 1.4 0.649 -- 0.244 2.46 20.7 600 -- --
334.03 0.851 3.62 0.489 0.861 1.31 -- 1.54 0.334 2.54 20.6 611 -- --
335.75 0.853 3.66 0.154 0.877 1.43 -- -- 0.241 2.62 20.72 601 -- --
359.42 0.883 3.62 0.468 -- 1.39 -- 1.46 0.328 -- 20.5 921 -- --
371.37 0.903 3.62 0.55 0.848 -- 0.905 -- 0.498 0.148 -- -- -- --
374.82 0.907 3.62 0.513 0.847 -- -- -- 0.493 0.347 -- -- -- --
360.64 0.884 3.67 0.103 -- 1.47 -- -- 0.222 -- 20.7 926 -- --
336.34 0.854 3.67 -- 0.876 1.47 -- -- 0.213 2.71 20.68 608 -- --
419.87 0.957 3.6 0.541 -- -- -- -- 0.506 -- -- -- -- --
381.76 0.914 3.63 -- 0.854 -- -- -- 0.435 0.379 -- -- -- --
360.9 0.885 3.67 -- -- 1.5 -- -- 0.205 -- 20.64 926 -- --
427.6 0.965 3.62 -- -- -- -- -- 0.446 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 328.04 temperature 15 270 > th dose dependent rect. 16 15
13 329.71 temperature 20 10 > th dose dependent sin 12 NA
14 329.88 atmosphere 995 90 > th dose dependent rect. 11 16
17 330.21 temperature 20 270 > th dose dependent sin 14 NA
24 330.64 atmosphere 1000 10 > th dose dependent rect. 12 15
35 331.22 temperature 10 720 > th dose dependent rect. 8 17
52 331.89 temperature 30 90 < th dose dependent rect. 11 16
55 331.93 temperature 10 270 > th dose dependent rect. 1 21
59 332.16 temperature 30 90 < th dose dependent rect. 22 5
69 332.50 temperature 20 720 > th dose dependent rect. 3 21
77 332.63 temperature 10 720 > th dose dependent rect. 3 22
83 332.70 temperature 30 10 < th dose dependent sin 12 NA
91 332.80 temperature 20 720 > th dose dependent rect. 8 21
98 332.91 temperature 10 270 > th dose dependent sin 14 NA
124 333.12 temperature 10 720 > th dose dependent rect. 8 21
155 333.38 temperature 30 270 < th dose dependent rect. 19 8
174 333.52 temperature 20 10 > th dose dependent rect. 17 14
176 333.53 temperature 20 720 > th dose dependent rect. 10 23
200 333.73 temperature 30 270 < th dose dependent rect. 22 2
204 333.75 temperature 20 720 > th dose dependent rect. 21 23
205 333.76 temperature 20 720 > th dose dependent rect. 16 23
217 333.82 temperature 15 720 > th dose dependent sin 20 NA
232 333.93 temperature 20 720 > th dose dependent no NA NA
261 334.10 temperature 20 720 > th dose dependent rect. 23 23
358 334.73 temperature 20 1440 > th dose dependent rect. 4 1
394 334.90 temperature 10 10 > th dose dependent rect. 13 23
422 335.07 temperature 10 720 > th dose dependent rect. 21 23
425 335.10 temperature 10 270 > th dose dependent rect. 13 9
426 335.10 temperature 20 10 > th dose dependent rect. 17 16
435 335.14 temperature 10 720 > th dose dependent rect. 10 23
447 335.23 temperature 10 720 > th dose dependent rect. 16 23
491 335.48 temperature 10 720 > th dose dependent no NA NA
495 335.50 temperature 30 270 < th dose dependent rect. 17 10
518 335.63 temperature 20 1440 > th dose dependent rect. 22 12
628 336.14 temperature 25 10 < th dose dependent rect. 23 21
637 336.17 temperature 30 10 < th dose dependent rect. 22 18
644 336.21 temperature 30 720 < th dose independent rect. 10 17
651 336.26 temperature 20 1440 > th dose dependent rect. 3 4
664 336.30 temperature 30 10 < th dose dependent rect. 22 8
686 336.36 temperature 15 720 > th dose dependent rect. 10 10
692 336.39 temperature 25 1440 < th dose independent rect. 2 8
728 336.57 temperature 20 1440 > th dose dependent sin 9 NA
735 336.61 temperature 25 1440 < th dose independent rect. 15 19
760 336.71 temperature 25 1440 < th dose independent sin 6 NA
853 337.05 temperature 25 1440 < th dose independent rect. 22 20
871 337.11 temperature 30 720 < th dose dependent rect. 5 19
894 337.20 temperature 30 720 < th dose independent rect. 5 16
895 337.20 temperature 30 720 < th dose independent rect. 5 22
931 337.32 temperature 30 720 < th dose independent rect. 24 23
958 337.38 temperature 15 10 > th dose dependent rect. 3 21
973 337.43 temperature 20 10 > th dose independent rect. 17 16
988 337.46 temperature 30 720 < th dose independent rect. 5 12