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Os03g0168200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.031) R2 : 0.803
β1 : 1.27 (0.114) R2dD : 0.0556 R2D : 0.0331
β2 : 2.56 (0.0885) R2dC : 0.478 R2C : 0.671
β3 : -1.36 (0.11) R2dE : 0.0872 R2E : 0.28
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.183 (0.0663) R2dN8 : 0.00439 R2N8 : -0.00497
σ : 0.58
deviance : 155.34
__
_____
C
peak time of C : 14.9
E
wheather : wind
threshold : 4.479
memory length : 72
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.25
open length of G : 3.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
152.75 0.581 11.5 1.3 2.54 -1.4 -0.841 0.208 0.185 14.9 4.315 77 3.13 4
152.68 0.575 11.5 1.29 2.56 -1.37 -0.871 -- 0.178 14.9 4.236 70 3.25 3.9
154.73 0.579 11.5 1.31 2.54 -1.4 -- 0.8 0.197 14.9 4.273 77 3.12 3.97
155.34 0.58 11.5 1.27 2.56 -1.36 -- -- 0.183 14.9 4.479 72 3.25 3.9
404.88 0.937 11.5 1.39 -- -2.55 -- 1.37 0.289 -- 9.189 43 2.65 4.92
192.59 0.651 11.5 1.19 3.18 -- -0.614 -- 0.162 15.5 -- -- -- --
193.76 0.652 11.5 1.18 3.18 -- -- -- 0.159 15.5 -- -- -- --
402.75 0.935 11.4 1.26 -- -2.51 -- -- 0.264 -- 10.85 45 2.53 5.07
197.31 0.654 11.5 -- 2.51 -1.18 -- -- 0.0876 14.9 7.674 90 3.07 3.95
760.01 1.29 11.5 1.04 -- -- -- -- 0.0744 -- -- -- -- --
230.25 0.71 11.5 -- 3.16 -- -- -- 0.0277 15.5 -- -- -- --
412.31 0.946 11.5 -- -- -2.35 -- -- 0.11 -- 18.76 40 1.56 6.08
788.68 1.31 11.5 -- -- -- -- -- -0.0413 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 153.16 wind 5.0 90 < th dose dependent rect. 3 4
5 155.14 temperature 15.0 90 > th dose independent rect. 19 8
6 155.38 precipitation 0.1 90 < th dose independent rect. 19 8
7 155.38 precipitation 0.1 90 < th dose dependent rect. 19 8
8 155.71 radiation 40.0 90 < th dose dependent rect. 3 6
9 155.79 precipitation 0.1 270 < th dose independent rect. 2 3
10 155.79 precipitation 0.1 270 < th dose dependent rect. 2 3
11 155.81 precipitation 0.1 90 < th dose independent rect. 3 16
12 155.81 precipitation 0.1 90 < th dose dependent rect. 3 16
14 155.91 wind 5.0 10 < th dose dependent rect. 3 6
17 156.06 wind 5.0 90 < th dose dependent rect. 3 6
18 156.09 humidity 50.0 90 > th dose dependent rect. 3 4
19 156.10 temperature 15.0 90 > th dose independent rect. 7 20
21 156.15 temperature 30.0 90 < th dose independent rect. 19 8
22 156.15 humidity 50.0 90 > th dose independent rect. 19 8
24 156.15 atmosphere 995.0 90 > th dose independent rect. 19 8
25 156.15 radiation 1.0 90 < th dose independent rect. 19 8
30 156.15 temperature 10.0 90 > th dose independent rect. 3 16
31 156.15 atmosphere 1015.0 90 < th dose independent rect. 3 16
32 156.15 radiation 1.0 90 < th dose dependent rect. 19 8
38 156.20 temperature 25.0 270 < th dose independent rect. 2 3
39 156.22 wind 5.0 90 < th dose independent rect. 3 4
40 156.23 wind 9.0 90 < th dose independent rect. 19 8
42 156.27 humidity 60.0 90 > th dose dependent rect. 3 6
47 156.50 humidity 80.0 90 > th dose independent rect. 3 4
51 156.71 precipitation 0.1 90 < th dose independent rect. 7 20
52 156.71 precipitation 0.1 90 < th dose dependent rect. 7 20
55 156.82 radiation 1.0 270 < th dose dependent rect. 2 3
58 156.89 temperature 10.0 90 > th dose independent rect. 3 4
61 156.89 humidity 50.0 90 > th dose independent rect. 3 4
64 156.89 atmosphere 995.0 90 > th dose independent rect. 3 4
65 156.89 atmosphere 1015.0 90 < th dose independent rect. 3 4
66 156.89 radiation 30.0 90 < th dose independent rect. 3 4
82 156.90 temperature 10.0 270 > th dose independent rect. 5 21
83 156.92 radiation 40.0 270 < th dose dependent rect. 2 3
86 156.95 wind 9.0 90 < th dose independent rect. 7 20
88 156.98 wind 9.0 90 < th dose independent rect. 3 16
90 157.00 radiation 1.0 270 < th dose independent rect. 2 3
94 157.06 radiation 20.0 90 < th dose independent rect. 3 6
104 157.43 precipitation 0.1 270 < th dose independent rect. 5 21
105 157.43 precipitation 0.1 270 < th dose dependent rect. 5 21
108 157.54 temperature 10.0 270 > th dose dependent rect. 2 3
110 157.62 atmosphere 995.0 90 > th dose independent rect. 3 16
116 157.70 precipitation 0.1 270 < th dose independent rect. 1 5
117 157.70 precipitation 0.1 270 < th dose dependent rect. 1 5
119 157.76 wind 9.0 270 < th dose independent rect. 5 21
126 157.96 wind 1.0 270 > th dose independent rect. 3 1
137 158.29 wind 7.0 270 < th dose independent rect. 1 5
148 158.42 humidity 50.0 270 > th dose dependent rect. 1 5
174 158.61 temperature 10.0 270 > th dose independent rect. 1 5
176 158.61 temperature 30.0 270 < th dose independent rect. 1 5
177 158.61 humidity 50.0 270 > th dose independent rect. 1 5
180 158.61 atmosphere 995.0 270 > th dose independent rect. 1 5
181 158.61 atmosphere 1015.0 270 < th dose independent rect. 1 5
182 158.61 radiation 20.0 270 < th dose independent rect. 1 5
189 158.66 wind 9.0 90 < th dose dependent rect. 19 8
204 158.82 radiation 40.0 270 < th dose dependent rect. 1 5
234 159.03 atmosphere 1005.0 270 > th dose independent rect. 2 3
235 159.05 radiation 30.0 90 < th dose dependent rect. 3 8
261 159.42 temperature 15.0 90 > th dose independent rect. 9 18
270 159.56 humidity 60.0 90 > th dose dependent rect. 3 8
273 159.62 precipitation 0.1 10 < th dose independent rect. 3 6
276 159.62 precipitation 0.1 10 < th dose dependent rect. 3 6
280 159.66 radiation 20.0 10 < th dose independent rect. 3 6
282 159.68 wind 3.0 30 < th dose independent rect. 3 6
286 159.74 atmosphere 995.0 90 > th dose independent rect. 7 20
288 159.76 precipitation 0.1 90 < th dose independent rect. 3 6
289 159.76 precipitation 0.1 90 < th dose dependent rect. 3 6
295 159.84 temperature 15.0 10 > th dose independent rect. 9 18
300 159.90 radiation 40.0 10 < th dose dependent rect. 3 6
307 160.04 atmosphere 995.0 270 > th dose independent rect. 5 21
336 160.31 atmosphere 1005.0 10 > th dose independent rect. 3 6
346 160.36 precipitation 0.1 10 < th dose independent rect. 3 4
349 160.36 precipitation 0.1 10 < th dose dependent rect. 3 4
374 160.43 wind 9.0 90 < th dose independent rect. 9 18
380 160.52 precipitation 0.1 90 < th dose independent rect. 9 18
381 160.52 precipitation 0.1 90 < th dose dependent rect. 9 18
389 160.59 wind 9.0 90 < th dose independent rect. 3 6
390 160.59 temperature 10.0 90 > th dose independent rect. 3 6
393 160.59 atmosphere 995.0 90 > th dose independent rect. 3 6
394 160.59 atmosphere 1015.0 90 < th dose independent rect. 3 6
396 160.62 radiation 1.0 270 < th dose independent rect. 2 7
441 160.89 radiation 20.0 90 < th dose dependent rect. 3 16
444 160.91 wind 9.0 10 < th dose independent rect. 9 18
445 160.91 precipitation 0.1 10 < th dose independent rect. 9 18
446 160.91 precipitation 0.1 10 < th dose dependent rect. 9 18
455 160.98 wind 9.0 270 < th dose independent rect. 15 15
473 161.15 atmosphere 995.0 270 > th dose dependent rect. 2 3
490 161.25 wind 7.0 10 < th dose independent rect. 3 6
492 161.30 atmosphere 995.0 90 > th dose dependent rect. 19 8
497 161.34 temperature 10.0 10 > th dose independent rect. 3 6
499 161.34 temperature 30.0 10 < th dose independent rect. 3 6
500 161.34 humidity 50.0 10 > th dose independent rect. 3 6
502 161.34 atmosphere 995.0 10 > th dose independent rect. 3 6
503 161.34 atmosphere 1015.0 10 < th dose independent rect. 3 6
527 161.38 wind 9.0 270 < th dose independent rect. 6 9
560 161.53 precipitation 0.1 270 < th dose independent rect. 6 9
561 161.53 precipitation 0.1 270 < th dose independent rect. 15 15
562 161.53 precipitation 0.1 270 < th dose dependent rect. 6 9
563 161.53 precipitation 0.1 270 < th dose dependent rect. 15 15
571 161.59 radiation 30.0 270 < th dose dependent rect. 1 8
608 161.71 temperature 10.0 270 > th dose independent rect. 6 9
609 161.71 atmosphere 1015.0 270 < th dose independent rect. 6 9
610 161.71 temperature 10.0 270 > th dose independent rect. 15 15
615 161.73 temperature 15.0 10 > th dose independent rect. 20 7
621 161.77 precipitation 0.1 10 < th dose independent rect. 3 17
622 161.77 precipitation 0.1 10 < th dose dependent rect. 3 17
626 161.79 humidity 50.0 90 > th dose dependent rect. 19 8
636 161.90 wind 9.0 10 < th dose independent rect. 7 20
637 161.91 humidity 50.0 90 > th dose independent rect. 3 16
643 161.96 temperature 10.0 10 > th dose dependent rect. 3 4
670 162.01 radiation 40.0 270 < th dose independent rect. 15 15
682 162.06 atmosphere 1015.0 90 < th dose dependent rect. 3 4
696 162.07 atmosphere 995.0 270 > th dose independent rect. 6 9
781 162.30 wind 9.0 90 < th dose dependent rect. 3 16
792 162.44 humidity 50.0 90 > th dose dependent rect. 3 16
834 162.67 temperature 10.0 10 > th dose dependent rect. 3 6
858 162.79 humidity 80.0 90 > th dose independent rect. 3 8
866 162.82 radiation 1.0 270 < th dose independent rect. 2 15
908 162.99 precipitation 0.1 10 < th dose independent rect. 20 7
910 162.99 precipitation 0.1 10 < th dose dependent rect. 20 7
916 163.02 radiation 1.0 270 < th dose independent rect. 1 18