Os03g0167200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os03g0167200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107 | 0.486 | 8.81 | -0.46 | 0.905 | 0.76 | -0.157 | 0.909 | 0.239 | 1.14 | 29.71 | 1253 | -- | -- |
| 107.2 | 0.482 | 8.79 | -0.268 | 0.892 | 0.833 | -0.179 | -- | 0.253 | 1.18 | 29.7 | 1256 | -- | -- |
| 106.99 | 0.482 | 8.81 | -0.49 | 0.91 | 0.756 | -- | 1.04 | 0.266 | 1.13 | 29.64 | 1248 | -- | -- |
| 107.25 | 0.482 | 8.79 | -0.257 | 0.908 | 0.866 | -- | -- | 0.265 | 1.12 | 29.72 | 1248 | -- | -- |
| 147.46 | 0.566 | 8.77 | -0.375 | -- | 0.929 | -- | 0.567 | 0.286 | -- | 29.7 | 1737 | -- | -- |
| 143.49 | 0.562 | 8.77 | -0.542 | 0.764 | -- | -0.391 | -- | 0.331 | 1.09 | -- | -- | -- | -- |
| 144.13 | 0.562 | 8.77 | -0.528 | 0.764 | -- | -- | -- | 0.333 | 1.08 | -- | -- | -- | -- |
| 146.59 | 0.564 | 8.74 | -0.225 | -- | 0.954 | -- | -- | 0.439 | -- | 29.29 | 1720 | -- | -- |
| 108.89 | 0.486 | 8.78 | -- | 0.91 | 0.905 | -- | -- | 0.289 | 1.11 | 29.7 | 1253 | -- | -- |
| 180.41 | 0.628 | 8.76 | -0.499 | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
| 151.47 | 0.576 | 8.76 | -- | 0.756 | -- | -- | -- | 0.392 | 1.05 | -- | -- | -- | -- |
| 147.95 | 0.567 | 8.73 | -- | -- | 0.983 | -- | -- | 0.45 | -- | 29.2 | 1718 | -- | -- |
| 186.97 | 0.638 | 8.75 | -- | -- | -- | -- | -- | 0.404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.11 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 18 | 107.26 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 21 | 107.41 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 36 | 107.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 37 | 108.04 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 38 | 108.14 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 69 | 108.91 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 71 | 109.09 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 73 | 109.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 21 |
| 75 | 109.11 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 77 | 109.13 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 79 | 109.13 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 21 |
| 95 | 109.26 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 96 | 109.27 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 119 | 109.43 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 120 | 109.43 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 122 | 109.43 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 18 |
| 153 | 109.53 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 154 | 109.54 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 157 | 109.58 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 181 | 109.59 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 185 | 109.60 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 15 |
| 189 | 109.60 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 196 | 109.61 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 199 | 109.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 12 |
| 204 | 109.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 18 |
| 219 | 109.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 22 |
| 228 | 109.62 | temperature | 30.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 293 | 109.65 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 305 | 109.67 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 16 |
| 325 | 109.69 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 11 |
| 327 | 109.70 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 339 | 109.73 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 341 | 109.73 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 373 | 109.75 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 380 | 109.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 381 | 109.78 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 387 | 109.80 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 392 | 109.80 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 487 | 109.81 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 488 | 109.82 | temperature | 30.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 523 | 109.84 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 524 | 109.85 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 559 | 109.88 | humidity | 60.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 657 | 110.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 661 | 110.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 663 | 110.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 688 | 110.12 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 691 | 110.13 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 692 | 110.13 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 15 |
| 719 | 110.15 | humidity | 60.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 737 | 110.19 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 765 | 110.23 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 815 | 110.43 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 10 | 5 |
| 818 | 110.44 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 877 | 110.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 892 | 110.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 902 | 110.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 908 | 110.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 911 | 110.54 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 921 | 110.57 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 923 | 110.58 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 925 | 110.60 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 927 | 110.60 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 968 | 110.62 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 5 | NA |