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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0166600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.83 (0.0464) R2 : 0.107
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.33 (0.21) R2dE : 0.0868 R2E : 0.0991
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.165 (0.102) R2dN8 : 0.00739 R2N8 : 0.0197
σ : 0.86
deviance : 341.26
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 88.26
memory length : 1845
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
328.93 0.852 3.82 0.641 0.038 -1.2 -1.1 0.31 -0.109 17 88.91 1849 -- --
329.05 0.845 3.81 0.611 0.0344 -1.18 -1.05 -- -0.112 16.9 88.49 1850 -- --
331.74 0.848 3.81 0.601 0.053 -1.18 -- -0.0559 -0.118 13.1 88.64 1848 -- --
331.7 0.848 3.82 0.601 0.0456 -1.21 -- -- -0.119 15.9 88 1869 -- --
331.79 0.848 3.81 0.604 -- -1.16 -- -0.152 -0.118 -- 88 1855 -- --
349.31 0.876 3.85 0.794 0.169 -- 1.13 -- -0.277 5.61 -- -- -- --
352.24 0.879 3.85 0.8 0.185 -- -- -- -0.281 6.75 -- -- -- --
331.77 0.848 3.82 0.613 -- -1.19 -- -- -0.122 -- 87.9 1869 -- --
341.15 0.86 3.82 -- 0.0512 -1.37 -- -- -0.162 15.1 87.56 1862 -- --
354.04 0.879 3.85 0.805 -- -- -- -- -0.277 -- -- -- -- --
369.13 0.899 3.87 -- 0.195 -- -- -- -0.37 6.51 -- -- -- --
341.26 0.86 3.83 -- -- -1.33 -- -- -0.165 -- 88.26 1845 -- --
371.12 0.899 3.87 -- -- -- -- -- -0.367 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 329.66 temperature 20 270 < th dose independent rect. 4 1
2 330.42 humidity 90 1440 < th dose independent sin 22 NA
3 330.54 humidity 90 1440 < th dose independent rect. 5 17
4 330.59 wind 9 43200 < th dose dependent rect. 24 3
6 330.61 wind 9 43200 < th dose dependent rect. 22 6
8 330.66 temperature 20 270 < th dose independent rect. 3 5
12 330.78 humidity 90 1440 < th dose independent rect. 5 15
15 330.81 wind 1 43200 > th dose dependent rect. 22 6
19 330.93 humidity 70 10 < th dose independent rect. 7 1
79 330.93 humidity 70 10 < th dose dependent rect. 7 1
140 330.96 temperature 25 270 < th dose dependent rect. 3 5
143 330.99 wind 7 43200 < th dose independent rect. 19 8
151 331.05 wind 1 43200 > th dose dependent rect. 20 10
155 331.08 wind 1 43200 > th dose dependent rect. 22 9
156 331.09 wind 5 43200 > th dose dependent rect. 19 8
158 331.10 wind 9 43200 < th dose dependent rect. 1 1
165 331.12 wind 9 14400 < th dose independent rect. 9 1
166 331.12 wind 7 43200 > th dose independent rect. 20 7
198 331.24 wind 5 43200 > th dose dependent rect. 18 13
201 331.27 wind 1 43200 > th dose dependent rect. 24 3
213 331.30 wind 5 43200 < th dose independent rect. 18 13
221 331.32 humidity 90 1440 > th dose independent rect. 10 10
229 331.33 wind 5 43200 > th dose independent rect. 18 13
232 331.34 temperature 25 270 < th dose dependent rect. 23 9
234 331.35 wind 1 43200 > th dose dependent sin 10 NA
239 331.36 humidity 90 1440 > th dose independent sin 22 NA
241 331.37 wind 9 43200 < th dose dependent sin 10 NA
367 331.66 humidity 90 1440 < th dose independent rect. 10 10
375 331.67 humidity 90 1440 > th dose independent rect. 5 17
395 331.71 wind 5 43200 < th dose independent rect. 22 3
398 331.72 wind 5 43200 > th dose independent rect. 22 3
424 331.77 wind 5 43200 < th dose independent sin 11 NA
425 331.77 wind 3 43200 > th dose independent rect. 24 6
428 331.77 wind 5 43200 > th dose dependent rect. 22 1
432 331.78 wind 5 43200 > th dose independent sin 11 NA
457 331.81 radiation 1 4320 < th dose independent rect. 18 16
466 331.81 wind 7 43200 < th dose dependent rect. 22 15
467 331.82 wind 3 43200 > th dose independent rect. 4 2
484 331.85 radiation 40 14400 < th dose independent rect. 15 5
492 331.86 humidity 90 1440 < th dose independent rect. 10 12
521 331.90 radiation 1 4320 < th dose independent rect. 5 5
532 331.91 wind 3 43200 < th dose independent rect. 24 6
543 331.92 wind 3 43200 < th dose independent rect. 1 4
552 331.92 atmosphere 1000 30 < th dose dependent rect. 6 2
573 331.94 atmosphere 1000 90 < th dose independent rect. 6 1
596 331.96 radiation 1 4320 < th dose independent rect. 22 12
610 331.97 radiation 1 4320 > th dose independent rect. 5 5
618 331.97 wind 3 1440 > th dose dependent rect. 13 2
651 332.00 wind 3 43200 < th dose independent rect. 4 2
678 332.02 wind 9 14400 > th dose independent rect. 9 1
746 332.07 wind 3 43200 > th dose dependent rect. 4 3
851 332.16 wind 3 43200 > th dose independent rect. 23 14
862 332.17 radiation 40 14400 < th dose independent rect. 15 8
868 332.17 wind 7 43200 > th dose dependent rect. 1 1
965 332.25 wind 7 43200 > th dose independent rect. 22 1
969 332.25 wind 3 43200 < th dose independent rect. 23 14
980 332.26 wind 3 43200 < th dose independent rect. 23 12
989 332.27 wind 9 43200 < th dose independent rect. 21 2