Os03g0164100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0164100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.26 | 0.449 | 5.91 | -0.0902 | 0.784 | 1.21 | 0.214 | 2.03 | 0.0935 | 4 | 11.03 | 5355 | -- | -- |
| 92.52 | 0.448 | 5.97 | -0.328 | 0.759 | 0.797 | 0.219 | -- | 0.0122 | 3.96 | 21.64 | 2777 | -- | -- |
| 91.39 | 0.445 | 5.91 | -0.0873 | 0.785 | 1.22 | -- | 2.06 | 0.0933 | 4.02 | 10.86 | 5369 | -- | -- |
| 92.62 | 0.448 | 5.98 | -0.331 | 0.748 | 0.807 | -- | -- | 0.0174 | 4.05 | 21.7 | 2741 | -- | -- |
| 123.96 | 0.519 | 5.91 | -0.03 | -- | 1.26 | -- | 2.11 | 0.112 | -- | 13.34 | 4037 | -- | -- |
| 114.63 | 0.502 | 5.94 | -0.0105 | 0.836 | -- | 0.337 | -- | 0.195 | 3.74 | -- | -- | -- | -- |
| 114.96 | 0.502 | 5.94 | -0.0155 | 0.838 | -- | -- | -- | 0.193 | 3.78 | -- | -- | -- | -- |
| 122.16 | 0.515 | 5.99 | -0.341 | -- | 0.942 | -- | -- | 0.0122 | -- | 22.19 | 2657 | -- | -- |
| 94.64 | 0.453 | 5.96 | -- | 0.871 | 0.804 | -- | -- | 0.0633 | 4.26 | 22.3 | 2009 | -- | -- |
| 153.74 | 0.579 | 5.94 | 0.0193 | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
| 114.97 | 0.502 | 5.94 | -- | 0.838 | -- | -- | -- | 0.195 | 3.78 | -- | -- | -- | -- |
| 124.8 | 0.52 | 5.97 | -- | -- | 0.848 | -- | -- | 0.0784 | -- | 22.64 | 2651 | -- | -- |
| 153.75 | 0.579 | 5.94 | -- | -- | -- | -- | -- | 0.213 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 89.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 5 | 90.36 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 8 | 90.41 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 10 | 90.49 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 11 |
| 16 | 90.55 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 9 |
| 22 | 90.57 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 6 |
| 45 | 90.63 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 48 | 90.63 | temperature | 10 | 4320 | > th | dose dependent | rect. | 15 | 15 |
| 58 | 90.65 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 9 |
| 79 | 90.67 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 94 | 90.69 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 2 |
| 107 | 90.71 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 108 | 90.71 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 2 |
| 126 | 90.73 | temperature | 10 | 4320 | > th | dose dependent | sin | 14 | NA |
| 155 | 90.77 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 183 | 90.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 269 | 90.91 | temperature | 30 | 4320 | < th | dose dependent | sin | 13 | NA |
| 290 | 90.93 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 645 | 91.43 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 693 | 91.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 811 | 91.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 895 | 91.70 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |