Os03g0163500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exocyst complex subunit Sec15-like family protein.
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Os03g0163500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exocyst complex subunit Sec15-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.41 | 0.334 | 7.56 | -0.963 | 0.541 | 0.833 | -0.6 | -4.15 | -0.0896 | 10.5 | 31.33 | 1306 | -- | -- |
| 51 | 0.333 | 7.48 | -0.305 | 0.557 | 0.378 | -0.605 | -- | -0.0935 | 10.4 | 30.71 | 1182 | -- | -- |
| 51.82 | 0.335 | 7.55 | -0.938 | 0.545 | 0.806 | -- | -3.89 | -0.0906 | 10.4 | 31.88 | 1348 | -- | -- |
| 52.32 | 0.337 | 7.48 | -0.305 | 0.553 | 0.383 | -- | -- | -0.0896 | 10.5 | 30.9 | 1171 | -- | -- |
| 69.29 | 0.388 | 7.57 | -0.92 | -- | 0.751 | -- | -3.88 | -0.111 | -- | 32.7 | 1445 | -- | -- |
| 57.54 | 0.356 | 7.5 | -0.179 | 0.502 | -- | -0.657 | -- | -0.159 | 10.3 | -- | -- | -- | -- |
| 59.27 | 0.361 | 7.5 | -0.205 | 0.507 | -- | -- | -- | -0.161 | 10.2 | -- | -- | -- | -- |
| 70.05 | 0.39 | 7.5 | -0.304 | -- | 0.316 | -- | -- | -0.109 | -- | 31.5 | 1391 | -- | -- |
| 54.62 | 0.344 | 7.47 | -- | 0.549 | 0.346 | -- | -- | -0.0669 | 10.5 | 31.2 | 1162 | -- | -- |
| 74.84 | 0.404 | 7.51 | -0.213 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 60.38 | 0.363 | 7.49 | -- | 0.508 | -- | -- | -- | -0.138 | 10.2 | -- | -- | -- | -- |
| 72.22 | 0.396 | 7.49 | -- | -- | 0.265 | -- | -- | -0.0804 | -- | 32.1 | 1409 | -- | -- |
| 76.04 | 0.407 | 7.5 | -- | -- | -- | -- | -- | -0.138 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.06 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 2 | 48.17 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 3 | 48.29 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 5 | 48.40 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 10 | 48.46 | wind | 5 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 18 | 48.62 | wind | 1 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 25 | 48.90 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 28 | 48.94 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 29 | 48.94 | wind | 7 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 39 | 49.03 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 42 | 49.07 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 49 | 49.18 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 66 | 49.26 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 94 | 49.35 | wind | 5 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 101 | 49.40 | wind | 3 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 107 | 49.41 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 129 | 49.53 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 133 | 49.56 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 154 | 49.63 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 161 | 49.63 | wind | 9 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 189 | 49.66 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 12 |
| 208 | 49.68 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 223 | 49.69 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 225 | 49.69 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 13 |
| 236 | 49.70 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 277 | 49.74 | wind | 5 | 14400 | > th | dose dependent | rect. | 4 | 8 |
| 341 | 49.80 | wind | 9 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 356 | 49.83 | wind | 3 | 43200 | > th | dose independent | sin | 8 | NA |
| 407 | 49.89 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 427 | 49.91 | wind | 1 | 43200 | > th | dose dependent | sin | 7 | NA |
| 460 | 49.94 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 498 | 50.00 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 538 | 50.06 | wind | 3 | 43200 | < th | dose independent | sin | 8 | NA |
| 594 | 50.10 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 598 | 50.10 | wind | 9 | 43200 | < th | dose dependent | sin | 7 | NA |
| 604 | 50.11 | radiation | 40 | 1440 | > th | dose dependent | sin | 13 | NA |
| 723 | 50.19 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 727 | 50.19 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 745 | 50.23 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 824 | 50.27 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 825 | 50.27 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 872 | 50.29 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 928 | 50.33 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 942 | 50.34 | wind | 7 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 947 | 50.35 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 974 | 50.37 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 12 |