Os03g0162000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dimethylaniline monooxygenase-like protein (Flavin-containing monooxygenase YUCCA).
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Os03g0162000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dimethylaniline monooxygenase-like protein (Flavin-containing monooxygenase YUCCA).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.49 | 0.741 | 5.78 | 2.29 | 3.34 | -1.38 | 1.05 | -0.131 | 1.08 | 21.1 | 20.13 | 593 | -- | -- |
| 248.53 | 0.734 | 5.78 | 2.31 | 3.34 | -1.36 | 1.01 | -- | 1.08 | 21.1 | 20.2 | 592 | -- | -- |
| 251.87 | 0.739 | 5.77 | 2.32 | 3.33 | -1.33 | -- | 0.269 | 1.09 | 21.1 | 20.1 | 610 | -- | -- |
| 252.06 | 0.739 | 5.78 | 2.28 | 3.34 | -1.36 | -- | -- | 1.08 | 21.1 | 20.15 | 610 | -- | -- |
| 787.63 | 1.31 | 5.69 | 2.14 | -- | -1.25 | -- | -0.187 | 1.09 | -- | 21.5 | 1558 | -- | -- |
| 298.79 | 0.81 | 5.84 | 1.83 | 3.15 | -- | 0.954 | -- | 0.809 | 21.1 | -- | -- | -- | -- |
| 301.97 | 0.814 | 5.84 | 1.8 | 3.15 | -- | -- | -- | 0.809 | 21.1 | -- | -- | -- | -- |
| 787.84 | 1.31 | 5.68 | 2.18 | -- | -1.25 | -- | -- | 1.1 | -- | 21.5 | 1558 | -- | -- |
| 374.86 | 0.902 | 5.83 | -- | 3.28 | -0.64 | -- | -- | 0.854 | 21.3 | 21.4 | 693 | -- | -- |
| 876.28 | 1.38 | 5.75 | 1.81 | -- | -- | -- | -- | 0.791 | -- | -- | -- | -- | -- |
| 387.24 | 0.921 | 5.88 | -- | 3.15 | -- | -- | -- | 0.608 | 21.2 | -- | -- | -- | -- |
| 884.43 | 1.39 | 5.73 | -- | -- | -1.07 | -- | -- | 0.875 | -- | 22.4 | 1540 | -- | -- |
| 962.4 | 1.45 | 5.8 | -- | -- | -- | -- | -- | 0.591 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 240.43 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 12 |
| 2 | 240.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 3 | 240.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 4 |
| 19 | 243.36 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 21 |
| 26 | 243.84 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 19 |
| 47 | 245.08 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 12 |
| 55 | 245.48 | temperature | 15 | 90 | > th | dose dependent | sin | 8 | NA |
| 56 | 245.52 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 21 |
| 88 | 247.07 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 100 | 247.29 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 5 |
| 105 | 247.52 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 21 |
| 152 | 248.48 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 21 |
| 162 | 248.71 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 22 |
| 183 | 248.97 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 15 |
| 185 | 249.01 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 17 |
| 210 | 249.29 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 23 |
| 223 | 249.50 | temperature | 20 | 720 | > th | dose independent | sin | 12 | NA |
| 228 | 249.54 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 256 | 249.76 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 14 |
| 263 | 249.81 | temperature | 20 | 720 | < th | dose independent | rect. | 11 | 23 |
| 283 | 249.98 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 316 | 250.31 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 344 | 250.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 363 | 250.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 21 |
| 452 | 251.36 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 496 | 251.63 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 506 | 251.69 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 14 |
| 551 | 251.90 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 563 | 251.99 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 578 | 252.09 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 605 | 252.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 611 | 252.36 | temperature | 20 | 270 | > th | dose independent | sin | 7 | NA |
| 612 | 252.36 | temperature | 20 | 720 | < th | dose independent | sin | 11 | NA |
| 618 | 252.37 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 654 | 252.59 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 689 | 252.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 21 |
| 705 | 252.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 714 | 252.88 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 20 |
| 823 | 253.50 | temperature | 20 | 270 | < th | dose independent | sin | 6 | NA |
| 852 | 253.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 875 | 253.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 894 | 253.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 951 | 254.04 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 7 |
| 954 | 254.05 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 9 |