Os03g0161200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sulfate transporter 3.1 (AST12) (AtST1).
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Os03g0161200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sulfate transporter 3.1 (AST12) (AtST1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.27 | 0.538 | 11.8 | -2.67 | 3.13 | 1.75 | 2.03 | -4.02 | -0.259 | 6.65 | 24.07 | 1322 | -- | -- |
| 140.19 | 0.551 | 11.7 | -1.76 | 3.25 | 1.44 | 1.87 | -- | -0.246 | 6.45 | 21.89 | 7467 | -- | -- |
| 141.16 | 0.553 | 11.8 | -2.61 | 3.14 | 1.71 | -- | -3.85 | -0.251 | 6.52 | 24.19 | 1359 | -- | -- |
| 148.61 | 0.568 | 11.7 | -1.67 | 3.2 | 1.32 | -- | -- | -0.185 | 6.38 | 22.65 | 7361 | -- | -- |
| 651.23 | 1.19 | 11.8 | -2.47 | -- | 1.91 | -- | -3.35 | -0.199 | -- | 24 | 1337 | -- | -- |
| 205.41 | 0.672 | 11.6 | -1.09 | 3.21 | -- | 1.95 | -- | 0.262 | 6.42 | -- | -- | -- | -- |
| 214.58 | 0.686 | 11.6 | -1.06 | 3.22 | -- | -- | -- | 0.255 | 6.33 | -- | -- | -- | -- |
| 658.84 | 1.2 | 11.7 | -1.63 | -- | 1.73 | -- | -- | -0.0801 | -- | 24 | 1341 | -- | -- |
| 204.99 | 0.667 | 11.6 | -- | 3.16 | 0.904 | -- | -- | 0.0986 | 6.41 | 28.4 | 8533 | -- | -- |
| 752.05 | 1.28 | 11.7 | -0.978 | -- | -- | -- | -- | 0.324 | -- | -- | -- | -- | -- |
| 244.35 | 0.731 | 11.6 | -- | 3.2 | -- | -- | -- | 0.373 | 6.35 | -- | -- | -- | -- |
| 698.96 | 1.23 | 11.6 | -- | -- | 0.983 | -- | -- | 0.493 | -- | 33.48 | 7057 | -- | -- |
| 777.27 | 1.3 | 11.6 | -- | -- | -- | -- | -- | 0.432 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 29 | 131.29 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 53 | 131.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 86 | 132.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 12 |
| 231 | 132.72 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 320 | 135.47 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 360 | 136.78 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 9 |
| 509 | 139.16 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 512 | 139.18 | temperature | 30 | 720 | < th | dose independent | sin | 12 | NA |
| 550 | 139.70 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 675 | 140.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 16 |
| 679 | 140.72 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 707 | 140.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 15 |
| 716 | 140.99 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 16 |
| 745 | 141.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 820 | 141.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 827 | 141.63 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 843 | 141.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 21 |
| 844 | 141.70 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 874 | 141.81 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 20 |
| 978 | 142.41 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |