Os03g0158900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os03g0158900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.66 | 0.518 | 7.23 | 1.81 | 1.47 | -0.407 | 0.974 | 2.75 | 0.0439 | 16.7 | 81.95 | 1570 | -- | -- |
| 131.37 | 0.534 | 7.27 | 1.55 | 1.37 | -0.406 | 1.18 | -- | 0.0265 | 17 | 97.23 | 1216 | -- | -- |
| 123.59 | 0.518 | 7.23 | 1.84 | 1.51 | -0.45 | -- | 3.08 | 0.0544 | 16.8 | 82 | 1674 | -- | -- |
| 134.81 | 0.541 | 7.26 | 1.55 | 1.38 | -0.437 | -- | -- | 0.0336 | 17.1 | 96 | 1216 | -- | -- |
| 182.69 | 0.63 | 7.26 | 1.52 | -- | 1.42 | -- | 1.13 | -0.0422 | -- | 124.2 | 312 | -- | -- |
| 134.46 | 0.544 | 7.27 | 1.52 | 1.41 | -- | 1.23 | -- | 0.0111 | 16.8 | -- | -- | -- | -- |
| 138.34 | 0.551 | 7.27 | 1.53 | 1.42 | -- | -- | -- | 0.0172 | 16.9 | -- | -- | -- | -- |
| 183.87 | 0.632 | 7.26 | 1.47 | -- | 1.51 | -- | -- | -0.0359 | -- | 133.5 | 309 | -- | -- |
| 198.05 | 0.655 | 7.3 | -- | 1.36 | -0.304 | -- | -- | -0.138 | 17 | 136.2 | 1224 | -- | -- |
| 245.45 | 0.732 | 7.25 | 1.47 | -- | -- | -- | -- | -0.0196 | -- | -- | -- | -- | -- |
| 199.77 | 0.661 | 7.31 | -- | 1.4 | -- | -- | -- | -0.153 | 16.9 | -- | -- | -- | -- |
| 240.55 | 0.722 | 7.29 | -- | -- | 1.52 | -- | -- | -0.199 | -- | 160 | 312 | -- | -- |
| 302.75 | 0.812 | 7.29 | -- | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.90 | wind | 7 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 6 | 115.20 | wind | 7 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 7 | 115.40 | wind | 7 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 9 | 115.50 | wind | 7 | 14400 | > th | dose dependent | rect. | 16 | 5 |
| 25 | 116.09 | wind | 5 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 31 | 116.12 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 35 | 116.15 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 20 |
| 36 | 116.16 | wind | 7 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 37 | 116.17 | wind | 7 | 14400 | > th | dose independent | rect. | 16 | 14 |
| 41 | 116.20 | humidity | 90 | 720 | > th | dose dependent | rect. | 12 | 10 |
| 74 | 116.48 | wind | 7 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 127 | 116.74 | wind | 9 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 163 | 116.91 | wind | 9 | 14400 | > th | dose dependent | rect. | 16 | 20 |
| 167 | 116.93 | humidity | 90 | 720 | > th | dose independent | rect. | 12 | 12 |
| 192 | 117.03 | wind | 7 | 14400 | < th | dose independent | sin | 14 | NA |
| 213 | 117.10 | wind | 7 | 14400 | > th | dose independent | sin | 14 | NA |
| 264 | 117.26 | temperature | 25 | 720 | < th | dose independent | rect. | 13 | 15 |
| 354 | 117.54 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 361 | 117.57 | wind | 7 | 14400 | > th | dose dependent | sin | 13 | NA |
| 421 | 117.73 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 440 | 117.74 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 16 |
| 495 | 117.85 | temperature | 25 | 720 | < th | dose independent | sin | 16 | NA |
| 496 | 117.85 | wind | 5 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 557 | 117.97 | humidity | 50 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 574 | 118.02 | wind | 7 | 14400 | > th | dose independent | rect. | 3 | 18 |
| 588 | 118.05 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 16 |
| 599 | 118.08 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 603 | 118.09 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 16 |
| 619 | 118.12 | wind | 7 | 14400 | < th | dose independent | rect. | 3 | 18 |
| 702 | 118.29 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 717 | 118.31 | humidity | 50 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 734 | 118.32 | humidity | 50 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 778 | 118.38 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 22 |
| 798 | 118.40 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 832 | 118.45 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 833 | 118.45 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 843 | 118.46 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 853 | 118.47 | wind | 5 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 865 | 118.48 | humidity | 50 | 14400 | < th | dose dependent | rect. | 8 | 9 |
| 882 | 118.49 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 889 | 118.50 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 936 | 118.54 | humidity | 50 | 14400 | < th | dose dependent | sin | 2 | NA |