Os03g0157600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os03g0157600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 471.82 | 1.02 | 7.75 | -8.1 | 0.676 | 2.87 | 1.13 | -5.76 | -1.04 | 5.14 | 24.82 | 8529 | -- | -- |
| 507.88 | 1.05 | 7.56 | -7.4 | 0.86 | 3.43 | 1.66 | -- | -0.819 | 5.18 | 21.3 | 8937 | -- | -- |
| 474.7 | 1.01 | 7.75 | -8.09 | 0.689 | 2.88 | -- | -5.7 | -1.05 | 5.53 | 24.8 | 8517 | -- | -- |
| 509.72 | 1.05 | 7.55 | -7.31 | 0.815 | 3.41 | -- | -- | -0.814 | 5.19 | 21.6 | 9017 | -- | -- |
| 499.01 | 1.04 | 7.75 | -8.02 | -- | 2.94 | -- | -5.52 | -1.02 | -- | 24.83 | 8487 | -- | -- |
| 747.52 | 1.28 | 7.26 | -4.78 | 0.81 | -- | 1.38 | -- | 0.492 | 4.59 | -- | -- | -- | -- |
| 752.34 | 1.28 | 7.27 | -4.79 | 0.825 | -- | -- | -- | 0.485 | 4.87 | -- | -- | -- | -- |
| 525.19 | 1.07 | 7.58 | -6.38 | -- | 2.87 | -- | -- | -0.776 | -- | 23.6 | 9905 | -- | -- |
| 1283.4 | 1.67 | 7.23 | -- | 0.619 | 1.27 | -- | -- | 0.65 | 4.47 | 29.4 | 8329 | -- | -- |
| 788.28 | 1.31 | 7.27 | -4.76 | -- | -- | -- | -- | 0.506 | -- | -- | -- | -- | -- |
| 1357.19 | 1.72 | 7.15 | -- | 0.74 | -- | -- | -- | 1.02 | 5.07 | -- | -- | -- | -- |
| 1303.54 | 1.68 | 7.24 | -- | -- | 1.3 | -- | -- | 0.669 | -- | 29.37 | 8350 | -- | -- |
| 1385.94 | 1.74 | 7.16 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 455.03 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 2 | 455.04 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 9 | 455.76 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 22 |
| 17 | 456.56 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 21 |
| 37 | 457.92 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 21 |
| 43 | 458.37 | temperature | 25 | 43200 | > th | dose independent | rect. | 22 | 17 |
| 53 | 458.54 | temperature | 25 | 43200 | > th | dose independent | sin | 5 | NA |
| 58 | 458.64 | temperature | 25 | 43200 | < th | dose independent | sin | 5 | NA |
| 63 | 458.72 | temperature | 25 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 64 | 458.73 | temperature | 25 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 69 | 458.82 | wind | 5 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 72 | 458.86 | temperature | 25 | 43200 | < th | dose independent | rect. | 21 | 19 |
| 76 | 458.89 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 82 | 458.91 | temperature | 25 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 89 | 459.02 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 107 | 459.18 | temperature | 25 | 43200 | < th | dose independent | rect. | 13 | 20 |
| 142 | 459.48 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 14 |
| 145 | 459.51 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 150 | 459.54 | wind | 5 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 167 | 459.68 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 168 | 459.68 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 202 | 459.85 | temperature | 25 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 209 | 459.88 | wind | 5 | 43200 | > th | dose independent | sin | 2 | NA |
| 221 | 459.95 | temperature | 25 | 43200 | > th | dose dependent | rect. | 23 | 17 |
| 243 | 460.05 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 251 | 460.08 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 259 | 460.10 | temperature | 25 | 43200 | > th | dose independent | no | NA | NA |
| 265 | 460.13 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 300 | 460.25 | wind | 5 | 43200 | > th | dose dependent | sin | 2 | NA |
| 316 | 460.29 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 317 | 460.29 | temperature | 25 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 395 | 460.51 | temperature | 25 | 43200 | < th | dose independent | no | NA | NA |
| 450 | 460.72 | temperature | 25 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 463 | 460.77 | temperature | 25 | 43200 | > th | dose independent | sin | 15 | NA |
| 478 | 460.80 | temperature | 25 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 516 | 460.95 | temperature | 25 | 43200 | > th | dose dependent | sin | 2 | NA |
| 554 | 461.12 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 556 | 461.12 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 601 | 461.25 | temperature | 25 | 43200 | < th | dose independent | sin | 15 | NA |
| 647 | 461.40 | wind | 5 | 43200 | < th | dose independent | sin | 2 | NA |
| 723 | 461.68 | temperature | 20 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 735 | 461.74 | temperature | 25 | 43200 | > th | dose dependent | rect. | 10 | 17 |
| 740 | 461.75 | temperature | 20 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 879 | 462.03 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 952 | 462.24 | wind | 5 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 976 | 462.28 | temperature | 25 | 43200 | > th | dose independent | rect. | 8 | 1 |