Os03g0154700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 40S ribosomal protein S9.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0154700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to 40S ribosomal protein S9.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.01 | 0.385 | 14.1 | -0.455 | 0.778 | 0.706 | 0.394 | -1.89 | -0.343 | 18.4 | 20.5 | 2716 | -- | -- |
| 72.91 | 0.398 | 14.1 | -0.14 | 0.755 | 1.07 | 0.294 | -- | -0.292 | 18.3 | 19.92 | 2694 | -- | -- |
| 67.39 | 0.382 | 14.1 | -0.464 | 0.782 | 0.707 | -- | -1.91 | -0.343 | 18.4 | 20.52 | 2719 | -- | -- |
| 72.05 | 0.395 | 14.1 | -0.192 | 0.775 | 1.24 | -- | -- | -0.304 | 18.4 | 19.4 | 2812 | -- | -- |
| 98.65 | 0.463 | 14.1 | -0.39 | -- | 0.743 | -- | -1.8 | -0.286 | -- | 19.41 | 2253 | -- | -- |
| 94.49 | 0.456 | 14 | 0.447 | 0.75 | -- | 0.614 | -- | 0.00652 | 18.6 | -- | -- | -- | -- |
| 95.44 | 0.457 | 14 | 0.438 | 0.752 | -- | -- | -- | 0.00835 | 18.6 | -- | -- | -- | -- |
| 101.88 | 0.47 | 14 | -0.127 | -- | 1.13 | -- | -- | -0.255 | -- | 19.4 | 2139 | -- | -- |
| 72.12 | 0.396 | 14 | -- | 0.77 | 1.17 | -- | -- | -0.231 | 18.2 | 19 | 2736 | -- | -- |
| 124.93 | 0.522 | 14 | 0.42 | -- | -- | -- | -- | -0.00689 | -- | -- | -- | -- | -- |
| 100.5 | 0.469 | 14 | -- | 0.747 | -- | -- | -- | -0.0404 | 18.6 | -- | -- | -- | -- |
| 101.96 | 0.47 | 14 | -- | -- | 1.07 | -- | -- | -0.221 | -- | 19.45 | 2118 | -- | -- |
| 129.58 | 0.531 | 14 | -- | -- | -- | -- | -- | -0.0535 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 2 | 64.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 12 | 65.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 13 | 66.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 22 | 66.20 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 24 | 66.22 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 36 | 66.32 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 37 | 66.33 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 86 | 66.82 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 100 | 66.91 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 270 | 68.00 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 295 | 68.09 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 519 | 69.15 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 553 | 69.29 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 563 | 69.32 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 638 | 69.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 656 | 69.64 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 17 |
| 663 | 69.66 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 665 | 69.67 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 730 | 69.85 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 20 |
| 753 | 69.91 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 783 | 70.00 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 807 | 70.05 | humidity | 90 | 14400 | > th | dose independent | rect. | 16 | 12 |
| 826 | 70.08 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 832 | 70.10 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 836 | 70.10 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 9 | NA |
| 837 | 70.11 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 846 | 70.12 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 854 | 70.13 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 867 | 70.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 892 | 70.21 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 900 | 70.23 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 910 | 70.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 16 |
| 920 | 70.26 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 932 | 70.28 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 948 | 70.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 964 | 70.33 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 977 | 70.36 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 985 | 70.36 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 987 | 70.37 | humidity | 90 | 14400 | > th | dose independent | sin | 13 | NA |
| 994 | 70.38 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 1000 | 70.39 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 3 |