Os03g0154300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0154300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.8 | 0.42 | 3.1 | -0.237 | 0.117 | 0.437 | 0.406 | -4.47 | -0.0397 | 10.2 | 30.18 | 10 | -- | -- |
| 82.25 | 0.426 | 3.07 | 0.093 | 0.133 | -0.0792 | 0.352 | -- | -0.0336 | 10.2 | 32.06 | 14 | -- | -- |
| 80.3 | 0.417 | 3.1 | -0.226 | 0.121 | 0.526 | -- | -5.22 | -0.0272 | 10.1 | 30.4 | 10 | -- | -- |
| 82.61 | 0.423 | 3.07 | 0.118 | 0.122 | -0.107 | -- | -- | -0.0359 | 11 | 31.8 | 303 | -- | -- |
| 81.19 | 0.42 | 3.1 | -0.232 | -- | 0.535 | -- | -5.23 | -0.0257 | -- | 30.5 | 11 | -- | -- |
| 82.34 | 0.425 | 3.07 | 0.0884 | 0.131 | -- | 0.354 | -- | -0.0307 | 9.98 | -- | -- | -- | -- |
| 82.82 | 0.426 | 3.07 | 0.102 | 0.129 | -- | -- | -- | -0.0299 | 10 | -- | -- | -- | -- |
| 83.32 | 0.425 | 3.07 | 0.125 | -- | -0.117 | -- | -- | -0.0483 | -- | 31.8 | 978 | -- | -- |
| 82.93 | 0.424 | 3.07 | -- | 0.12 | -0.0935 | -- | -- | -0.0486 | 10.7 | 31.42 | 326 | -- | -- |
| 83.83 | 0.428 | 3.07 | 0.101 | -- | -- | -- | -- | -0.03 | -- | -- | -- | -- | -- |
| 83.1 | 0.426 | 3.07 | -- | 0.129 | -- | -- | -- | -0.0412 | 9.99 | -- | -- | -- | -- |
| 83.72 | 0.426 | 3.08 | -- | -- | -0.114 | -- | -- | -0.0566 | -- | 31.18 | 759 | -- | -- |
| 84.1 | 0.428 | 3.07 | -- | -- | -- | -- | -- | -0.0411 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.74 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 9 | 73.74 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 35 | 75.78 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 24 | 10 |
| 39 | 75.91 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 40 | 75.92 | wind | 1.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 43 | 76.03 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 24 | 9 |
| 48 | 76.19 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 49 | 76.19 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 104 | 76.26 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 108 | 76.89 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 111 | 77.08 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 112 | 77.20 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 142 | 77.24 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 159 | 77.24 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 208 | 77.31 | radiation | 20.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 273 | 77.45 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 2 |
| 383 | 77.64 | humidity | 60.0 | 10 | > th | dose independent | rect. | 14 | 11 |
| 392 | 77.79 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 423 | 77.88 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 424 | 77.88 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 441 | 77.90 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 442 | 77.91 | radiation | 30.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 444 | 77.93 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 446 | 77.94 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 448 | 77.96 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 449 | 77.96 | wind | 1.0 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 472 | 78.03 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 474 | 78.04 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 476 | 78.04 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 477 | 78.05 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 490 | 78.08 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 507 | 78.10 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 3 |
| 517 | 78.13 | radiation | 40.0 | 30 | > th | dose independent | sin | 11 | NA |
| 579 | 78.23 | radiation | 20.0 | 10 | < th | dose independent | rect. | 14 | 11 |
| 602 | 78.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 604 | 78.25 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 606 | 78.25 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 609 | 78.25 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 610 | 78.25 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 612 | 78.25 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 617 | 78.25 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 619 | 78.25 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 620 | 78.25 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 625 | 78.25 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 627 | 78.26 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 635 | 78.29 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 636 | 78.29 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 640 | 78.31 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 642 | 78.32 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 644 | 78.33 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 650 | 78.34 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 14 | 11 |
| 660 | 78.40 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 685 | 78.43 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 718 | 78.48 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 776 | 78.53 | wind | 1.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 821 | 78.56 | wind | 3.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 863 | 78.61 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 927 | 78.64 | humidity | 60.0 | 10 | > th | dose independent | sin | 13 | NA |
| 930 | 78.65 | radiation | 20.0 | 10 | < th | dose independent | sin | 14 | NA |
| 937 | 78.68 | humidity | 60.0 | 10 | < th | dose independent | sin | 13 | NA |
| 939 | 78.68 | humidity | 70.0 | 30 | > th | dose independent | rect. | 9 | 4 |
| 957 | 78.73 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 977 | 78.76 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 996 | 78.77 | wind | 3.0 | 10 | < th | dose independent | rect. | 16 | 1 |