Os03g0151600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GCN5-related N-acetyltransferase domain containing protein.
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Os03g0151600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GCN5-related N-acetyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.46 | 0.324 | 10.1 | 1.22 | 1.14 | -1.2 | -0.229 | -2.06 | -0.132 | 18 | 29.82 | 95 | -- | -- |
| 52.73 | 0.338 | 10.1 | 0.892 | 1.15 | -1.35 | 0.104 | -- | -0.181 | 17.9 | 52.9 | 88 | -- | -- |
| 47.57 | 0.321 | 10.1 | 1.2 | 1.14 | -1.2 | -- | -2.01 | -0.139 | 18 | 29.69 | 98 | -- | -- |
| 52.68 | 0.338 | 10.1 | 0.891 | 1.16 | -1.36 | -- | -- | -0.183 | 18 | 51.93 | 66 | -- | -- |
| 96.3 | 0.457 | 10.1 | 0.997 | -- | -2.28 | -- | -2.33 | -0.244 | -- | 46.89 | 252 | -- | -- |
| 70.16 | 0.393 | 10.1 | 1.17 | 1.45 | -- | 0.497 | -- | 0.00665 | 17.2 | -- | -- | -- | -- |
| 70.78 | 0.394 | 10.1 | 1.17 | 1.46 | -- | -- | -- | 0.00889 | 17.2 | -- | -- | -- | -- |
| 99.61 | 0.465 | 10.1 | 0.608 | -- | -2.26 | -- | -- | -0.366 | -- | 32.67 | 272 | -- | -- |
| 71.5 | 0.394 | 10.1 | -- | 1.04 | -1.79 | -- | -- | -0.331 | 18.2 | 205.2 | 100 | -- | -- |
| 181.7 | 0.63 | 10 | 1.12 | -- | -- | -- | -- | -0.0276 | -- | -- | -- | -- | -- |
| 106.68 | 0.483 | 10.1 | -- | 1.44 | -- | -- | -- | -0.121 | 17.3 | -- | -- | -- | -- |
| 109.2 | 0.487 | 10.1 | -- | -- | -2.41 | -- | -- | -0.475 | -- | 32.06 | 269 | -- | -- |
| 214.58 | 0.684 | 10.1 | -- | -- | -- | -- | -- | -0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.58 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 45.26 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 3 | 45.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 14 | 46.74 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 15 | 46.74 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 16 | 46.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 39 | 47.37 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 43 | 47.49 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 53 | 47.73 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 54 | 47.74 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 70 | 47.91 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 94 | 48.17 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 104 | 48.27 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 115 | 48.38 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 146 | 48.72 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 161 | 48.82 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 184 | 49.08 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 199 | 49.24 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 268 | 49.82 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 275 | 49.86 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 291 | 49.99 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 323 | 50.28 | temperature | 15.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 347 | 50.45 | temperature | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 384 | 50.65 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 486 | 51.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 500 | 51.24 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 523 | 51.31 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 568 | 51.56 | temperature | 30.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 576 | 51.58 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 614 | 51.76 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 631 | 51.83 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 643 | 51.88 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 644 | 51.88 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 662 | 51.94 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 688 | 52.06 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 691 | 52.07 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 734 | 52.23 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 22 |
| 746 | 52.27 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 16 |
| 762 | 52.32 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 802 | 52.47 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 23 |
| 847 | 52.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 884 | 52.71 | temperature | 25.0 | 720 | < th | dose dependent | sin | 21 | NA |
| 917 | 52.80 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 4 |