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Os03g0151100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Appr-1-p processing domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.92 (0.02) R2 : 0.626
β1 : -1.38 (0.0732) R2dD : 0.303 R2D : 0.258
β2 : 1.04 (0.0502) R2dC : 0.353 R2C : 0.329
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.181 (0.0427) R2dN8 : 0.0198 R2N8 : -0.0145
σ : 0.376
deviance : 64.48
__
_____
C
peak time of C : 3.42
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.73 0.363 9.94 -1.38 1.01 0.241 -0.121 0.232 -0.278 3.24 1006 362 -- --
59.85 0.36 9.94 -1.38 0.999 0.254 -0.138 -- -0.294 3.23 1006 305 -- --
59.72 0.36 9.94 -1.38 1 0.242 -- 0.208 -0.281 3.24 1006 359 -- --
59.83 0.36 9.94 -1.38 0.993 0.244 -- -- -0.288 3.26 1006 224 -- --
114.34 0.498 9.96 -1.44 -- 0.346 -- 0.243 -0.315 -- 1006 184 -- --
64.47 0.376 9.92 -1.38 1.04 -- -0.0398 -- -0.181 3.42 -- -- -- --
64.48 0.376 9.92 -1.38 1.04 -- -- -- -0.181 3.42 -- -- -- --
114.27 0.498 9.95 -1.34 -- 0.362 -- -- -0.306 -- 1006 153 -- --
109.87 0.488 9.91 -- 0.971 0.237 -- -- -0.138 3.39 1006 201 -- --
125.28 0.523 9.91 -1.34 -- -- -- -- -0.154 -- -- -- -- --
114.78 0.501 9.88 -- 1.01 -- -- -- -0.0273 3.42 -- -- -- --
160.97 0.591 9.92 -- -- 0.368 -- -- -0.173 -- 1006 100 -- --
172.47 0.613 9.88 -- -- -- -- -- -0.00528 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.68 temperature 30.0 270 < th dose independent rect. 3 16
10 57.62 temperature 30.0 270 < th dose independent rect. 2 9
14 57.87 temperature 10.0 90 > th dose dependent rect. 24 17
19 58.12 atmosphere 1005.0 270 > th dose independent rect. 2 8
21 58.15 atmosphere 1005.0 270 > th dose independent rect. 3 6
23 58.15 atmosphere 1005.0 270 > th dose independent rect. 2 18
24 58.16 atmosphere 1005.0 270 > th dose independent rect. 3 16
28 58.27 atmosphere 1005.0 270 > th dose independent rect. 15 17
40 58.50 radiation 40.0 270 < th dose independent rect. 2 9
45 58.53 atmosphere 1015.0 90 < th dose dependent rect. 24 17
46 58.56 wind 1.0 270 > th dose independent rect. 11 15
52 58.60 wind 1.0 1440 > th dose independent rect. 23 1
55 58.65 precipitation 0.1 270 < th dose independent rect. 2 9
56 58.65 precipitation 0.1 270 < th dose dependent rect. 2 9
67 58.74 humidity 50.0 720 > th dose dependent rect. 19 8
75 58.80 wind 1.0 4320 < th dose independent rect. 12 2
77 58.81 wind 1.0 4320 > th dose independent rect. 12 2
92 58.90 wind 1.0 4320 < th dose dependent rect. 12 2
94 58.92 atmosphere 995.0 270 > th dose dependent rect. 2 8
96 58.94 humidity 50.0 270 > th dose independent rect. 14 8
97 58.95 temperature 30.0 270 < th dose independent sin 3 NA
104 58.98 atmosphere 1005.0 10 > th dose independent rect. 18 14
109 59.00 wind 1.0 4320 < th dose independent rect. 11 4
115 59.03 wind 7.0 270 < th dose independent rect. 2 9
120 59.05 radiation 40.0 30 < th dose independent rect. 5 7
121 59.05 wind 1.0 90 > th dose independent rect. 24 17
124 59.06 wind 9.0 270 < th dose independent rect. 11 15
132 59.08 temperature 10.0 270 > th dose independent rect. 2 9
133 59.08 atmosphere 995.0 270 > th dose independent rect. 2 9
134 59.08 atmosphere 1015.0 270 < th dose independent rect. 2 9
135 59.08 temperature 10.0 270 > th dose independent rect. 11 15
136 59.08 precipitation 0.1 270 < th dose independent rect. 11 15
137 59.08 precipitation 0.1 270 < th dose dependent rect. 11 15
141 59.09 radiation 30.0 270 < th dose dependent rect. 15 18
142 59.10 temperature 20.0 90 > th dose independent rect. 24 17
145 59.10 temperature 30.0 270 < th dose dependent rect. 3 7
152 59.13 humidity 90.0 90 < th dose independent rect. 17 15
154 59.13 humidity 70.0 270 > th dose independent rect. 3 17
156 59.14 humidity 70.0 90 > th dose independent rect. 17 6
158 59.14 radiation 40.0 270 < th dose independent rect. 3 18
178 59.21 temperature 20.0 270 > th dose independent rect. 22 17
180 59.21 temperature 10.0 270 > th dose dependent rect. 7 9
183 59.22 temperature 30.0 10 < th dose independent rect. 5 7
196 59.25 wind 9.0 90 < th dose independent rect. 24 17
216 59.30 wind 1.0 1440 < th dose independent rect. 23 1
217 59.30 temperature 15.0 90 > th dose independent rect. 17 7
219 59.30 humidity 70.0 270 > th dose independent rect. 14 7
226 59.31 humidity 70.0 720 > th dose dependent rect. 18 13
233 59.33 temperature 30.0 270 < th dose independent rect. 14 8
245 59.35 temperature 30.0 270 < th dose independent rect. 14 21
269 59.41 wind 1.0 90 > th dose independent rect. 17 7
271 59.41 radiation 20.0 90 < th dose independent rect. 17 7
274 59.41 humidity 80.0 720 > th dose independent rect. 18 13
276 59.41 temperature 10.0 90 > th dose independent rect. 24 17
280 59.42 wind 9.0 90 < th dose independent rect. 17 7
281 59.42 humidity 50.0 270 > th dose independent rect. 2 9
283 59.42 atmosphere 1015.0 90 < th dose independent rect. 24 17
291 59.43 radiation 10.0 10 < th dose dependent rect. 17 7
304 59.46 humidity 60.0 720 > th dose dependent sin 13 NA
308 59.47 radiation 30.0 270 < th dose independent rect. 14 8
333 59.50 wind 1.0 270 > th dose independent rect. 8 9
344 59.51 humidity 90.0 720 < th dose dependent rect. 20 1
347 59.52 radiation 20.0 270 < th dose independent rect. 16 17
348 59.52 temperature 10.0 270 > th dose dependent rect. 9 17
350 59.53 humidity 50.0 30 > th dose independent rect. 17 7
363 59.54 radiation 40.0 90 < th dose dependent rect. 17 7
370 59.55 wind 9.0 270 < th dose dependent rect. 2 9
372 59.55 atmosphere 995.0 90 > th dose dependent rect. 17 15
374 59.56 wind 1.0 4320 > th dose independent rect. 11 8
378 59.56 precipitation 0.1 90 < th dose independent rect. 24 17
382 59.56 precipitation 0.1 90 < th dose dependent rect. 24 17
384 59.57 atmosphere 995.0 90 > th dose independent rect. 17 7
404 59.59 wind 1.0 720 < th dose independent rect. 6 20
406 59.59 humidity 90.0 720 < th dose dependent rect. 18 6
421 59.61 wind 1.0 4320 < th dose independent rect. 10 9
424 59.61 wind 7.0 270 < th dose independent rect. 17 15
432 59.62 wind 3.0 720 < th dose dependent rect. 23 2
444 59.64 precipitation 0.1 90 < th dose independent rect. 17 7
452 59.64 precipitation 0.1 90 < th dose dependent rect. 17 7
473 59.66 temperature 30.0 270 > th dose independent rect. 18 22
508 59.70 humidity 80.0 720 > th dose independent sin 12 NA
529 59.71 radiation 40.0 270 < th dose dependent rect. 14 8
531 59.71 humidity 90.0 720 < th dose dependent rect. 18 12
532 59.71 atmosphere 1015.0 270 < th dose dependent rect. 22 16
549 59.74 radiation 1.0 1440 < th dose independent rect. 11 1
553 59.74 radiation 1.0 1440 < th dose dependent rect. 11 1
560 59.75 wind 1.0 720 < th dose independent rect. 23 3
582 59.76 wind 9.0 270 < th dose dependent rect. 3 17
603 59.78 temperature 30.0 270 > th dose independent rect. 8 8
611 59.78 atmosphere 995.0 270 > th dose independent rect. 11 15
621 59.78 atmosphere 995.0 10 > th dose dependent rect. 5 7
640 59.80 temperature 20.0 10 > th dose independent rect. 24 17
646 59.81 humidity 80.0 720 > th dose independent rect. 18 10
650 59.81 humidity 90.0 720 > th dose dependent rect. 20 5
656 59.81 atmosphere 995.0 10 > th dose dependent rect. 18 14
657 59.81 temperature 30.0 270 < th dose dependent rect. 3 17
699 59.84 humidity 80.0 720 > th dose independent rect. 20 8
725 59.86 humidity 50.0 90 > th dose independent rect. 24 17
732 59.86 atmosphere 995.0 10 > th dose dependent rect. 5 18
737 59.87 atmosphere 1015.0 90 < th dose independent rect. 17 7
752 59.88 radiation 1.0 1440 > th dose independent rect. 8 5
759 59.88 wind 9.0 270 < th dose independent rect. 23 15
769 59.88 humidity 50.0 270 > th dose dependent rect. 3 17
784 59.89 humidity 50.0 270 > th dose independent rect. 16 15
796 59.90 wind 1.0 270 > th dose independent rect. 15 7
823 59.91 atmosphere 995.0 270 > th dose dependent rect. 3 17
825 59.92 wind 7.0 270 < th dose independent rect. 14 8
832 59.92 humidity 70.0 270 > th dose independent rect. 14 20
838 59.93 radiation 1.0 30 > th dose independent sin 6 NA
858 59.94 temperature 10.0 270 > th dose independent rect. 15 7
859 59.94 temperature 10.0 1440 > th dose independent rect. 18 7
863 59.94 humidity 50.0 1440 > th dose independent rect. 18 7
866 59.94 radiation 20.0 1440 < th dose independent rect. 18 7
880 59.94 temperature 30.0 270 < th dose independent rect. 16 16
881 59.94 temperature 10.0 1440 > th dose independent rect. 1 17
884 59.94 temperature 10.0 270 > th dose independent rect. 22 17
915 59.95 wind 1.0 720 < th dose dependent rect. 7 19
989 59.99 atmosphere 995.0 90 > th dose independent rect. 24 17
998 60.00 temperature 30.0 270 > th dose independent sin 3 NA