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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0151000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.35 (0.0237) R2 : 0.007
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0896 (0.0499) R2dN8 : 0.00904 R2N8 : 0.007
σ : 0.447
deviance : 91.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
85.83 0.435 3.27 0.6 0.114 -0.441 0.229 1.6 0.287 5.16 27.22 5775 -- --
85.94 0.432 3.31 0.489 0.0866 -0.551 0.129 -- 0.275 4.55 20.3 21046 -- --
85.96 0.432 3.27 0.61 0.114 -0.443 -- 1.63 0.289 5.46 27.2 5775 -- --
85.88 0.432 3.31 0.535 0.124 -0.579 -- -- 0.278 5.28 19.69 21427 -- --
86.14 0.432 3.26 0.811 -- -0.507 -- 2.46 0.295 -- 29.2 5896 -- --
90.84 0.447 3.35 -0.0118 0.112 -- 0.2 -- 0.0868 5.42 -- -- -- --
90.94 0.447 3.35 -0.0112 0.114 -- -- -- 0.086 5.64 -- -- -- --
86.51 0.433 3.3 0.555 -- -0.617 -- -- 0.297 -- 19.21 20467 -- --
87.66 0.436 3.33 -- 0.126 -0.271 -- -- 0.179 5.23 26.8 8192 -- --
91.61 0.447 3.35 -0.0075 -- -- -- -- 0.0887 -- -- -- -- --
90.94 0.446 3.35 -- 0.114 -- -- -- 0.0872 5.65 -- -- -- --
88.27 0.438 3.33 -- -- -0.274 -- -- 0.177 -- 27.1 7771 -- --
91.62 0.447 3.35 -- -- -- -- -- 0.0896 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.31 humidity 90 43200 > th dose dependent rect. 6 1
3 83.63 humidity 90 43200 > th dose independent rect. 4 5
5 83.69 humidity 90 43200 > th dose independent rect. 7 1
9 83.81 humidity 80 43200 > th dose independent rect. 7 7
10 83.82 humidity 80 43200 > th dose independent rect. 8 5
12 83.83 humidity 90 43200 > th dose independent rect. 2 12
13 83.84 humidity 90 43200 < th dose independent rect. 7 1
15 83.85 humidity 90 43200 > th dose independent rect. 3 10
24 83.88 radiation 1 43200 > th dose independent rect. 4 3
37 83.89 radiation 1 43200 < th dose independent rect. 5 2
51 83.93 humidity 80 43200 < th dose independent rect. 8 6
53 83.93 humidity 90 43200 > th dose dependent rect. 4 15
55 83.95 humidity 90 43200 > th dose dependent rect. 4 6
59 83.96 humidity 90 43200 > th dose dependent rect. 4 12
69 84.00 humidity 90 43200 > th dose dependent rect. 4 9
71 84.00 humidity 90 43200 > th dose dependent rect. 4 19
98 84.05 humidity 90 43200 > th dose dependent rect. 18 1
100 84.06 humidity 90 43200 > th dose independent sin 3 NA
119 84.07 humidity 90 43200 > th dose dependent sin 2 NA
120 84.07 humidity 70 43200 > th dose dependent rect. 7 7
138 84.12 humidity 90 43200 > th dose independent rect. 2 21
191 84.23 humidity 90 43200 < th dose independent rect. 3 10
192 84.23 humidity 90 43200 < th dose independent rect. 3 12
194 84.24 humidity 90 43200 < th dose independent rect. 4 7
254 84.33 humidity 70 43200 > th dose dependent rect. 10 1
255 84.33 humidity 90 43200 > th dose dependent rect. 22 1
257 84.33 humidity 90 43200 > th dose dependent rect. 17 6
274 84.35 humidity 90 43200 > th dose dependent sin 19 NA
278 84.36 humidity 90 43200 < th dose independent sin 3 NA
279 84.36 humidity 80 43200 < th dose independent rect. 9 3
330 84.37 humidity 90 43200 > th dose dependent rect. 11 13
342 84.38 humidity 90 43200 > th dose dependent rect. 9 16
412 84.46 radiation 1 43200 > th dose independent sin 9 NA
413 84.46 humidity 90 43200 > th dose independent rect. 22 1
428 84.47 wind 5 43200 > th dose independent rect. 4 16
430 84.47 humidity 90 43200 > th dose dependent no NA NA
431 84.47 wind 1 43200 < th dose dependent rect. 1 1
435 84.47 humidity 90 43200 > th dose dependent rect. 15 22
438 84.47 humidity 90 43200 > th dose dependent rect. 22 23
443 84.48 wind 5 43200 < th dose independent rect. 4 16
444 84.48 wind 5 43200 < th dose independent rect. 2 18
446 84.48 humidity 90 43200 < th dose independent rect. 3 20
466 84.49 wind 3 43200 > th dose dependent rect. 2 18
470 84.50 radiation 1 43200 < th dose independent sin 9 NA
477 84.50 temperature 25 43200 > th dose independent rect. 21 18
478 84.50 temperature 25 43200 < th dose independent rect. 21 18
479 84.50 temperature 25 43200 > th dose independent rect. 12 19
487 84.50 wind 3 43200 > th dose dependent rect. 5 12
488 84.50 wind 3 43200 > th dose dependent rect. 4 16
495 84.50 humidity 90 43200 > th dose dependent rect. 9 23
497 84.51 humidity 90 43200 < th dose independent rect. 22 1
508 84.51 temperature 25 43200 < th dose independent rect. 12 19
514 84.51 wind 3 43200 > th dose dependent sin 0 NA
516 84.51 humidity 90 43200 > th dose dependent rect. 18 3
524 84.51 wind 3 43200 > th dose dependent rect. 5 19
528 84.51 humidity 90 43200 > th dose dependent rect. 11 23
536 84.52 temperature 25 43200 > th dose independent rect. 14 16
544 84.52 temperature 25 43200 < th dose independent rect. 14 17
575 84.52 wind 3 43200 > th dose dependent rect. 23 21
581 84.53 temperature 25 43200 > th dose independent rect. 14 14
585 84.53 temperature 25 43200 < th dose independent rect. 14 15
615 84.53 temperature 25 43200 > th dose dependent rect. 14 1
628 84.54 temperature 25 43200 < th dose independent sin 5 NA
631 84.54 humidity 90 43200 > th dose independent rect. 18 1
688 84.55 temperature 25 43200 > th dose independent sin 5 NA
689 84.55 temperature 25 43200 > th dose independent no NA NA
771 84.56 temperature 25 43200 > th dose independent sin 15 NA
773 84.56 temperature 25 43200 < th dose independent sin 15 NA
774 84.56 temperature 25 43200 < th dose independent no NA NA
804 84.56 temperature 25 43200 > th dose independent rect. 3 23
827 84.56 wind 7 43200 > th dose dependent rect. 6 11
884 84.57 temperature 25 43200 > th dose independent rect. 6 21
902 84.57 temperature 25 43200 > th dose independent rect. 1 23
907 84.57 temperature 25 43200 < th dose independent rect. 4 23
929 84.57 wind 3 43200 > th dose dependent rect. 8 19
938 84.57 wind 3 43200 > th dose dependent rect. 8 23
992 84.58 temperature 25 43200 < th dose independent rect. 1 23