Os03g0145300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 14 protein.
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Os03g0145300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 14 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.25 | 0.639 | 3.41 | 0.29 | 0.0758 | -1.02 | 0.282 | -0.962 | -0.0883 | 5.33 | 5.3 | 3031 | -- | -- |
| 185.23 | 0.634 | 3.4 | 0.281 | 0.0866 | -0.93 | 0.265 | -- | -0.122 | 5.28 | 4.6 | 3046 | -- | -- |
| 185.34 | 0.634 | 3.4 | 0.282 | 0.0881 | -1 | -- | -0.852 | -0.0873 | 7.17 | 5.216 | 3030 | -- | -- |
| 185.25 | 0.634 | 3.4 | 0.287 | 0.108 | -0.943 | -- | -- | -0.119 | 6.98 | 4.6 | 3097 | -- | -- |
| 185.76 | 0.635 | 3.41 | 0.284 | -- | -0.986 | -- | -0.811 | -0.0842 | -- | 5.2 | 3030 | -- | -- |
| 195.21 | 0.655 | 3.41 | 0.0426 | 0.0625 | -- | 0.178 | -- | -0.135 | 5.68 | -- | -- | -- | -- |
| 195.28 | 0.654 | 3.41 | 0.044 | 0.0654 | -- | -- | -- | -0.135 | 6.54 | -- | -- | -- | -- |
| 185.76 | 0.635 | 3.4 | 0.277 | -- | -0.917 | -- | -- | -0.11 | -- | 4.685 | 3030 | -- | -- |
| 187.07 | 0.637 | 3.41 | -- | 0.0952 | -0.801 | -- | -- | -0.149 | 6.71 | 4.505 | 3039 | -- | -- |
| 195.5 | 0.653 | 3.41 | 0.0456 | -- | -- | -- | -- | -0.134 | -- | -- | -- | -- | -- |
| 195.33 | 0.654 | 3.41 | -- | 0.066 | -- | -- | -- | -0.14 | 6.5 | -- | -- | -- | -- |
| 187.52 | 0.638 | 3.41 | -- | -- | -0.79 | -- | -- | -0.147 | -- | 4.537 | 3030 | -- | -- |
| 195.56 | 0.653 | 3.41 | -- | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.38 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 176.60 | temperature | 25.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 6 | 177.32 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 10 | 177.47 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 12 | 177.48 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 13 | 177.49 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 16 | 177.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 19 | 177.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 23 | 177.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 29 | 177.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 30 | 177.52 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 50 | 177.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 57 | 177.63 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 60 | 177.67 | wind | 7.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 67 | 177.75 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 69 | 177.75 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 70 | 177.75 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 73 | 177.75 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 74 | 177.75 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 76 | 177.75 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 81 | 177.75 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 82 | 177.75 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 83 | 177.75 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 88 | 177.75 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 89 | 177.76 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 90 | 177.81 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 94 | 177.94 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 95 | 177.96 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 96 | 177.99 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 105 | 178.74 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 115 | 179.66 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 117 | 179.84 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 155 | 181.38 | wind | 1.0 | 720 | < th | dose dependent | rect. | 22 | 1 |
| 160 | 182.76 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 168 | 183.70 | wind | 1.0 | 720 | < th | dose independent | rect. | 22 | 1 |
| 170 | 183.83 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 183 | 184.61 | wind | 7.0 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 184 | 184.61 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 186 | 184.62 | wind | 5.0 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 187 | 184.63 | wind | 5.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 188 | 184.64 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 193 | 184.71 | wind | 5.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 198 | 184.77 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 209 | 184.86 | wind | 9.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 230 | 185.05 | wind | 7.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 241 | 185.12 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 312 | 185.62 | wind | 1.0 | 30 | < th | dose dependent | rect. | 9 | 15 |
| 356 | 185.82 | wind | 1.0 | 30 | < th | dose dependent | rect. | 17 | 7 |
| 456 | 186.57 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 14 | 3 |
| 510 | 186.87 | temperature | 25.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 515 | 186.89 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 517 | 186.89 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 580 | 187.10 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 594 | 187.15 | wind | 9.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 617 | 187.28 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 625 | 187.35 | wind | 1.0 | 30 | < th | dose dependent | rect. | 14 | 10 |
| 629 | 187.38 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 695 | 187.73 | wind | 1.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 723 | 187.87 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 8 | 4 |
| 725 | 187.88 | wind | 1.0 | 30 | < th | dose dependent | rect. | 11 | 13 |
| 734 | 187.92 | wind | 5.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 736 | 187.93 | wind | 5.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 764 | 188.04 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 771 | 188.06 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 825 | 188.28 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 8 | 4 |
| 838 | 188.31 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 849 | 188.33 | wind | 5.0 | 4320 | > th | dose dependent | sin | 9 | NA |
| 872 | 188.41 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 9 | 2 |
| 889 | 188.46 | wind | 1.0 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 899 | 188.49 | wind | 5.0 | 4320 | < th | dose independent | rect. | 22 | 19 |
| 926 | 188.56 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 938 | 188.61 | wind | 5.0 | 4320 | > th | dose independent | rect. | 22 | 19 |
| 983 | 188.69 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 994 | 188.71 | wind | 7.0 | 10 | < th | dose dependent | rect. | 20 | 14 |