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Os03g0144800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Xyloglucan galactosyltransferase KATAMARI 1 (EC 2.4.1.-) (MURUS3 protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.49 (0.0255) R2 : 0.367
β1 : -1.49 (0.0935) R2dD : 0.368 R2D : 0.3
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.327 (0.0545) R2dN8 : 0.0669 R2N8 : -0.000728
σ : 0.479
deviance : 105.11
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.32 0.41 8.44 -1.62 0.428 -0.71 -0.404 0.368 -0.132 8.42 61.57 1496 -- --
76.47 0.407 8.44 -1.62 0.433 -0.68 -0.409 -- -0.132 8.31 62.99 1489 -- --
76.57 0.408 8.44 -1.63 0.432 -0.698 -- 0.394 -0.129 8.13 62.26 1489 -- --
76.9 0.408 8.44 -1.62 0.432 -0.671 -- -- -0.138 8.15 62.62 1489 -- --
86.83 0.434 8.45 -1.63 -- -0.696 -- 0.408 -0.115 -- 63 1481 -- --
94.36 0.455 8.48 -1.49 0.431 -- -0.401 -- -0.332 8.18 -- -- -- --
94.76 0.456 8.48 -1.5 0.437 -- -- -- -0.333 7.84 -- -- -- --
87.17 0.435 8.45 -1.62 -- -0.672 -- -- -0.134 -- 62.23 1481 -- --
111.26 0.491 8.46 -- 0.494 -1.17 -- -- -0.374 7.86 62.07 29392 -- --
105.11 0.479 8.49 -1.49 -- -- -- -- -0.327 -- -- -- -- --
153.95 0.58 8.45 -- 0.427 -- -- -- -0.166 8.09 -- -- -- --
113.47 0.496 8.48 -- -- -1.58 -- -- -0.262 -- 64.94 30227 -- --
163.95 0.598 8.46 -- -- -- -- -- -0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.63 humidity 70 4320 > th dose independent rect. 19 10
2 71.64 humidity 70 4320 > th dose independent rect. 19 4
3 71.64 humidity 70 4320 > th dose independent rect. 19 12
6 71.71 humidity 70 4320 > th dose independent rect. 19 8
10 71.74 humidity 70 4320 < th dose independent rect. 19 12
13 71.82 humidity 70 4320 < th dose independent rect. 19 2
23 71.87 temperature 25 720 > th dose dependent rect. 18 4
26 72.05 temperature 25 720 > th dose dependent rect. 19 2
30 72.20 humidity 70 4320 < th dose dependent rect. 19 12
31 72.24 humidity 70 4320 < th dose dependent rect. 19 2
41 72.33 wind 1 1440 > th dose independent rect. 4 1
46 72.78 wind 1 1440 < th dose independent rect. 4 1
49 73.13 radiation 20 1440 < th dose independent rect. 16 4
58 73.35 radiation 20 1440 < th dose independent rect. 16 13
62 73.43 radiation 20 1440 < th dose independent rect. 16 15
67 73.48 radiation 10 1440 > th dose dependent rect. 16 15
70 73.54 temperature 25 720 > th dose dependent rect. 18 13
74 73.79 humidity 70 1440 < th dose independent sin 11 NA
75 73.79 radiation 10 1440 > th dose dependent rect. 16 1
115 74.29 temperature 25 720 > th dose independent rect. 19 1
117 74.37 radiation 10 1440 > th dose independent rect. 15 16
118 74.40 humidity 70 1440 < th dose independent rect. 17 17
119 74.41 humidity 70 1440 > th dose independent sin 10 NA
124 74.57 humidity 70 1440 < th dose independent rect. 17 19
125 74.60 temperature 30 4320 > th dose dependent rect. 18 15
129 74.73 radiation 40 1440 < th dose dependent rect. 16 15
133 74.86 radiation 20 1440 > th dose independent rect. 16 1
147 74.86 temperature 30 4320 > th dose dependent rect. 18 1
166 74.98 radiation 40 1440 < th dose dependent rect. 16 1
171 75.05 temperature 25 720 > th dose independent rect. 18 4
179 75.22 humidity 70 1440 > th dose independent rect. 17 19
214 75.42 humidity 70 1440 > th dose independent rect. 18 16
217 75.44 temperature 30 14400 < th dose independent rect. 18 2
220 75.45 temperature 30 14400 < th dose independent rect. 18 11
221 75.45 temperature 30 14400 < th dose independent rect. 18 13
222 75.45 radiation 40 1440 < th dose dependent rect. 16 4
247 75.52 temperature 30 4320 > th dose independent rect. 18 1
256 75.52 temperature 30 14400 < th dose independent rect. 18 9
277 75.60 radiation 40 1440 < th dose dependent rect. 16 11
288 75.67 radiation 40 1440 < th dose dependent rect. 16 9
293 75.68 wind 1 1440 < th dose dependent rect. 4 1
336 75.79 radiation 1 720 > th dose independent rect. 18 1
395 75.97 humidity 60 1440 > th dose independent rect. 11 8
420 76.10 temperature 30 1440 < th dose independent rect. 17 19
445 76.15 humidity 60 1440 > th dose independent rect. 11 16
448 76.15 humidity 60 1440 > th dose independent rect. 11 20
459 76.20 radiation 30 4320 < th dose independent rect. 6 2
461 76.22 radiation 10 1440 > th dose independent sin 13 NA
470 76.25 radiation 30 4320 < th dose independent rect. 2 6
475 76.26 temperature 30 1440 > th dose independent rect. 17 19
477 76.29 humidity 60 1440 > th dose independent rect. 12 2
481 76.29 temperature 25 720 > th dose dependent sin 13 NA
503 76.33 temperature 30 1440 < th dose independent sin 10 NA
510 76.36 radiation 30 4320 < th dose independent rect. 4 4
531 76.37 temperature 30 1440 < th dose independent rect. 16 17
544 76.38 temperature 30 1440 > th dose independent rect. 16 17
558 76.41 temperature 30 1440 > th dose independent sin 10 NA
647 76.55 radiation 30 1440 < th dose independent rect. 15 17
650 76.56 humidity 60 1440 > th dose independent rect. 11 4
664 76.60 humidity 80 1440 < th dose dependent rect. 16 21
671 76.62 temperature 30 1440 < th dose independent rect. 16 4
679 76.62 radiation 1 720 > th dose dependent rect. 18 1
692 76.64 humidity 60 1440 > th dose independent sin 19 NA
695 76.64 humidity 90 720 < th dose dependent rect. 18 2
703 76.65 temperature 30 1440 < th dose independent rect. 16 13
713 76.67 temperature 30 1440 < th dose independent rect. 16 11
730 76.68 temperature 30 1440 > th dose independent rect. 16 3
759 76.72 humidity 60 1440 < th dose independent rect. 12 1
813 76.82 humidity 60 1440 > th dose independent rect. 6 13
814 76.82 humidity 60 1440 > th dose independent rect. 2 17
873 76.91 humidity 80 1440 < th dose dependent rect. 7 12
877 76.92 humidity 60 1440 < th dose independent rect. 11 8
879 76.92 radiation 20 4320 > th dose dependent rect. 6 2
907 76.96 humidity 80 1440 < th dose dependent rect. 16 2
965 77.01 humidity 60 1440 > th dose independent rect. 6 23
973 77.02 humidity 60 1440 > th dose independent no NA NA