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Os03g0143800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytoplasmic fragile X mental retardation protein interacting protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.9 (0.018) R2 : 0.551
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.63 (0.044) R2dC : 0.208 R2C : 0.117
β3 : 0.9 (0.0476) R2dE : 0.369 R2E : 0.19
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.393 (0.0384) R2dN8 : 0.14 R2N8 : 0.0332
σ : 0.336
deviance : 52.14
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C
peak time of C : 9.79
E
wheather : temperature
threshold : 28.82
memory length : 1261
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.82 0.335 7.88 0.243 0.635 0.814 0.479 0.647 0.433 9.9 29.07 1246 -- --
50.84 0.332 7.9 0.124 0.644 0.89 0.479 -- 0.412 9.88 28.77 1248 -- --
51.67 0.335 7.89 0.26 0.629 0.806 -- 0.628 0.421 9.79 28.9 1257 -- --
51.67 0.335 7.9 0.134 0.637 0.875 -- -- 0.414 9.79 28.9 1258 -- --
74.01 0.401 7.91 0.133 -- 0.813 -- 0.127 0.394 -- 28.74 1384 -- --
88.02 0.44 7.93 0.374 0.565 -- 0.31 -- 0.299 9.1 -- -- -- --
88.35 0.44 7.93 0.385 0.565 -- -- -- 0.299 9.04 -- -- -- --
73.96 0.401 7.92 0.139 -- 0.799 -- -- 0.401 -- 28.77 1392 -- --
52.14 0.336 7.9 -- 0.63 0.9 -- -- 0.393 9.79 28.82 1261 -- --
106.7 0.483 7.94 0.384 -- -- -- -- 0.302 -- -- -- -- --
92.25 0.449 7.94 -- 0.565 -- -- -- 0.256 8.99 -- -- -- --
74.43 0.402 7.92 -- -- 0.823 -- -- 0.378 -- 28.59 1393 -- --
110.58 0.491 7.95 -- -- -- -- -- 0.26 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.27 humidity 70 720 > th dose independent rect. 17 10
2 52.24 temperature 30 1440 > th dose independent rect. 16 3
16 52.26 temperature 30 1440 > th dose dependent rect. 13 6
45 52.32 temperature 30 1440 > th dose independent sin 13 NA
46 52.33 temperature 30 1440 < th dose independent sin 13 NA
47 52.34 temperature 30 1440 < th dose independent rect. 16 8
49 52.35 temperature 30 1440 < th dose independent rect. 16 13
50 52.35 temperature 30 1440 < th dose independent rect. 16 15
57 52.37 temperature 30 1440 > th dose dependent sin 16 NA
59 52.38 temperature 30 1440 < th dose independent rect. 16 3
188 52.80 temperature 30 1440 > th dose dependent no NA NA
305 52.93 temperature 25 720 > th dose dependent rect. 17 16
307 52.95 temperature 30 1440 > th dose dependent rect. 17 23
316 53.05 humidity 70 720 > th dose independent rect. 16 5
318 53.07 temperature 30 1440 < th dose independent rect. 11 12
320 53.07 temperature 30 1440 < th dose independent rect. 11 17
322 53.07 temperature 30 1440 < th dose independent rect. 11 20
323 53.08 temperature 30 1440 < th dose independent rect. 11 8
330 53.08 temperature 30 1440 < th dose independent rect. 17 21
352 53.14 temperature 30 1440 < th dose independent rect. 9 10
353 53.14 temperature 30 1440 < th dose independent rect. 9 13
356 53.14 temperature 30 1440 < th dose independent rect. 9 19
358 53.14 temperature 30 1440 < th dose independent rect. 9 22
372 53.19 temperature 30 1440 > th dose independent rect. 11 8
427 53.26 temperature 30 1440 < th dose independent rect. 15 19
441 53.33 temperature 30 1440 > th dose independent rect. 9 10
457 53.36 humidity 70 720 > th dose independent rect. 16 15
485 53.39 temperature 30 1440 > th dose independent rect. 15 22
486 53.40 humidity 70 720 > th dose independent rect. 16 7
497 53.42 humidity 70 720 > th dose independent rect. 16 13
538 53.44 humidity 70 720 > th dose independent sin 12 NA
555 53.45 temperature 30 1440 < th dose independent rect. 2 22
562 53.46 temperature 30 1440 < th dose independent rect. 2 17
563 53.46 temperature 30 1440 < th dose independent rect. 6 17
579 53.46 temperature 30 1440 < th dose independent rect. 6 23
581 53.47 temperature 30 1440 < th dose independent no NA NA
609 53.47 temperature 30 1440 < th dose independent rect. 23 20
610 53.47 temperature 30 1440 < th dose independent rect. 6 21
711 53.70 temperature 30 1440 > th dose independent no NA NA
868 53.97 temperature 25 1440 > th dose dependent rect. 17 2
895 54.09 temperature 30 1440 < th dose independent rect. 9 5
901 54.13 temperature 30 1440 < th dose independent rect. 11 2
906 54.15 humidity 70 720 < th dose independent sin 12 NA
918 54.27 temperature 30 1440 > th dose independent rect. 11 2
947 54.39 humidity 70 720 < th dose independent rect. 17 16
973 54.51 temperature 30 1440 > th dose independent rect. 9 5