Os03g0141900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0141900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.85 | 0.562 | 11.8 | 0.638 | 0.877 | -1.57 | 0.851 | -1.27 | -0.321 | 8.55 | 21.6 | 1425 | -- | -- |
| 144.37 | 0.56 | 11.8 | 0.836 | 0.854 | -1.34 | 0.881 | -- | -0.223 | 8.33 | 22.2 | 1322 | -- | -- |
| 145.14 | 0.561 | 11.8 | 0.656 | 0.868 | -1.57 | -- | -1.29 | -0.323 | 8.64 | 21.56 | 1415 | -- | -- |
| 146.51 | 0.564 | 11.8 | 0.845 | 0.796 | -1.31 | -- | -- | -0.236 | 8.21 | 22.3 | 1159 | -- | -- |
| 169.5 | 0.606 | 11.8 | 0.641 | -- | -1.37 | -- | -0.652 | -0.248 | -- | 22.2 | 801 | -- | -- |
| 212.93 | 0.684 | 11.9 | 0.36 | 0.882 | -- | 0.787 | -- | -0.68 | 8.77 | -- | -- | -- | -- |
| 214.95 | 0.687 | 11.9 | 0.388 | 0.877 | -- | -- | -- | -0.679 | 8.89 | -- | -- | -- | -- |
| 171.18 | 0.609 | 11.8 | 0.836 | -- | -1.37 | -- | -- | -0.211 | -- | 22.29 | 797 | -- | -- |
| 162.94 | 0.595 | 11.8 | -- | 0.757 | -1.11 | -- | -- | -0.378 | 8.14 | 22.3 | 1020 | -- | -- |
| 258.87 | 0.752 | 11.9 | 0.388 | -- | -- | -- | -- | -0.672 | -- | -- | -- | -- | -- |
| 218.91 | 0.692 | 11.9 | -- | 0.878 | -- | -- | -- | -0.722 | 8.86 | -- | -- | -- | -- |
| 188.25 | 0.639 | 11.8 | -- | -- | -1.21 | -- | -- | -0.344 | -- | 22.34 | 783 | -- | -- |
| 262.83 | 0.757 | 11.9 | -- | -- | -- | -- | -- | -0.715 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 16 | 148.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 19 | 148.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 31 | 148.40 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 51 | 148.78 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 52 | 148.78 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 59 | 148.83 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 118 | 149.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 212 | 150.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 246 | 151.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 336 | 151.95 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 340 | 152.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 343 | 152.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 446 | 153.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 490 | 153.56 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 589 | 154.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 608 | 154.65 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 709 | 155.47 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 710 | 155.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 711 | 155.47 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 814 | 156.06 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 880 | 156.53 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 894 | 156.64 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 907 | 156.71 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 954 | 157.00 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 991 | 157.17 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |