Os03g0141800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
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Os03g0141800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF594 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.07 | 0.402 | 2.4 | 2.74 | 0.158 | -33.9 | -0.169 | 207 | 0.125 | 4.99 | 994.7 | 751 | -- | -- |
| 78.83 | 0.417 | 2.85 | 0.0518 | 0.194 | 0.472 | -0.0444 | -- | 0.121 | 4.98 | 996.4 | 73 | -- | -- |
| 73.13 | 0.398 | 2.4 | 2.73 | 0.157 | -33.8 | -- | 207 | 0.126 | 5.3 | 994.7 | 750 | -- | -- |
| 78.38 | 0.412 | 2.85 | 0.0448 | 0.19 | 0.497 | -- | -- | 0.125 | 5.05 | 997.5 | 125 | -- | -- |
| 74.42 | 0.402 | 2.38 | 2.86 | -- | -35.4 | -- | 216 | 0.13 | -- | 994.5 | 750 | -- | -- |
| 79.47 | 0.418 | 2.85 | 0.0626 | 0.185 | -- | -0.0781 | -- | 0.117 | 4.9 | -- | -- | -- | -- |
| 79.48 | 0.417 | 2.85 | 0.0629 | 0.185 | -- | -- | -- | 0.117 | 4.98 | -- | -- | -- | -- |
| 80.23 | 0.417 | 2.85 | 0.0501 | -- | 0.483 | -- | -- | 0.13 | -- | 997.5 | 179 | -- | -- |
| 78.38 | 0.412 | 2.85 | -- | 0.193 | 0.526 | -- | -- | 0.119 | 5.09 | 997.4 | 178 | -- | -- |
| 81.27 | 0.421 | 2.85 | 0.0696 | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
| 79.59 | 0.417 | 2.85 | -- | 0.186 | -- | -- | -- | 0.11 | 4.97 | -- | -- | -- | -- |
| 80.3 | 0.417 | 2.85 | -- | -- | 0.5 | -- | -- | 0.124 | -- | 997.5 | 178 | -- | -- |
| 81.4 | 0.421 | 2.85 | -- | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.24 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 59.74 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 8 | 66.09 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 15 | 66.09 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 33 | 66.19 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 52 | 67.83 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 59 | 68.72 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 70 | 69.31 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 88 | 70.57 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 89 | 70.59 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 90 | 70.67 | wind | 3.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 93 | 70.85 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 96 | 70.90 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 114 | 71.03 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 117 | 71.03 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 121 | 71.03 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 130 | 71.03 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 131 | 71.03 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 151 | 71.03 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 161 | 71.09 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 2 |
| 168 | 71.37 | wind | 5.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 177 | 71.58 | humidity | 80.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 185 | 71.78 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 186 | 71.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 2 | 1 |
| 187 | 71.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 190 | 71.82 | temperature | 10.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 192 | 71.82 | temperature | 30.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 193 | 71.82 | humidity | 50.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 196 | 71.82 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 197 | 71.82 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 199 | 71.82 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 204 | 71.82 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 205 | 71.82 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 214 | 71.98 | wind | 1.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 218 | 72.14 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 219 | 72.17 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 220 | 72.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 222 | 72.28 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 230 | 72.38 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 246 | 72.44 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 247 | 72.45 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 253 | 72.47 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 256 | 72.47 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 260 | 72.47 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 262 | 72.47 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 263 | 72.47 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 268 | 72.47 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 270 | 72.47 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 272 | 72.47 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 277 | 72.47 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 304 | 72.51 | wind | 9.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 363 | 72.76 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 23 |
| 366 | 72.76 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 399 | 73.07 | atmosphere | 995.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 402 | 73.07 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 528 | 73.48 | atmosphere | 995.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 554 | 73.70 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 555 | 73.71 | atmosphere | 995.0 | 720 | < th | dose independent | sin | 9 | NA |
| 770 | 74.79 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 12 | NA |
| 798 | 74.97 | wind | 5.0 | 10 | < th | dose dependent | rect. | 24 | 4 |
| 908 | 75.18 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 12 |
| 913 | 75.18 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 928 | 75.23 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 963 | 75.30 | wind | 9.0 | 720 | < th | dose independent | rect. | 15 | 12 |
| 964 | 75.30 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 994 | 75.37 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 4 |