Os03g0141700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0141700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 147.51 | 0.571 | 6.17 | -1.01 | 0.494 | -2.33 | 0.94 | 0.893 | -0.476 | 5.75 | 23.3 | 2057 | -- | -- |
| 148.3 | 0.567 | 6.12 | -0.668 | 0.482 | -2.29 | 0.995 | -- | -0.347 | 5.84 | 23.1 | 2070 | -- | -- |
| 149.57 | 0.57 | 6.16 | -0.992 | 0.497 | -2.33 | -- | 0.849 | -0.468 | 5.67 | 23.3 | 2064 | -- | -- |
| 150.68 | 0.572 | 6.13 | -0.654 | 0.49 | -2.3 | -- | -- | -0.374 | 5.69 | 23.21 | 2063 | -- | -- |
| 161.91 | 0.593 | 6.17 | -0.919 | -- | -2.32 | -- | 0.726 | -0.444 | -- | 23.2 | 2164 | -- | -- |
| 364.24 | 0.895 | 5.91 | 0.305 | 0.483 | -- | 0.851 | -- | 0.634 | 4.36 | -- | -- | -- | -- |
| 366.16 | 0.896 | 5.91 | 0.297 | 0.487 | -- | -- | -- | 0.629 | 4.1 | -- | -- | -- | -- |
| 162.13 | 0.593 | 6.13 | -0.625 | -- | -2.32 | -- | -- | -0.317 | -- | 23.1 | 2204 | -- | -- |
| 160.94 | 0.591 | 6.11 | -- | 0.461 | -2.14 | -- | -- | -0.218 | 5.57 | 23.2 | 2045 | -- | -- |
| 379.06 | 0.91 | 5.91 | 0.317 | -- | -- | -- | -- | 0.642 | -- | -- | -- | -- | -- |
| 368.48 | 0.898 | 5.92 | -- | 0.493 | -- | -- | -- | 0.596 | 4.09 | -- | -- | -- | -- |
| 171.53 | 0.61 | 6.1 | -- | -- | -2.16 | -- | -- | -0.2 | -- | 23 | 2191 | -- | -- |
| 381.71 | 0.912 | 5.92 | -- | -- | -- | -- | -- | 0.607 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 2 | 148.89 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 18 | 149.92 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 11 |
| 19 | 150.00 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 33 | 150.23 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 11 |
| 35 | 150.25 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 36 | 150.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 7 |
| 46 | 150.34 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 14 |
| 55 | 150.40 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 81 | 150.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 96 | 150.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 123 | 151.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 7 |
| 133 | 151.06 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 214 | 151.54 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 274 | 151.85 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 328 | 152.11 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 420 | 152.55 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 515 | 152.92 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 540 | 153.03 | temperature | 25 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 563 | 153.12 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 596 | 153.30 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 3 |