Os03g0141100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0141100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 488.97 | 1.04 | 3.94 | -1.34 | 2.25 | -0.812 | -1.9 | -5.65 | 1.83 | 3.53 | 67.73 | 8273 | -- | -- |
| 533.4 | 1.08 | 3.98 | -0.902 | 2.18 | -1.09 | -2.02 | -- | 1.97 | 3.58 | 73 | 16411 | -- | -- |
| 499.89 | 1.04 | 3.94 | -1.32 | 2.24 | -0.795 | -- | -5.88 | 1.84 | 3.62 | 67.81 | 8262 | -- | -- |
| 546.97 | 1.09 | 3.96 | -0.97 | 2.16 | -1.19 | -- | -- | 2.06 | 3.62 | 72.87 | 16404 | -- | -- |
| 727 | 1.26 | 4.04 | -0.751 | -- | -1.18 | -- | 0.817 | 1.79 | -- | 67.81 | 8262 | -- | -- |
| 557.7 | 1.11 | 4.04 | -0.854 | 2.16 | -- | -2.25 | -- | 1.75 | 3.56 | -- | -- | -- | -- |
| 572.7 | 1.12 | 4.03 | -0.815 | 2.16 | -- | -- | -- | 1.77 | 3.73 | -- | -- | -- | -- |
| 676.89 | 1.22 | 4.03 | -0.623 | -- | -1.22 | -- | -- | 1.84 | -- | 74.82 | 14854 | -- | -- |
| 547.29 | 1.09 | 3.94 | -- | 2.16 | -1.49 | -- | -- | 2.14 | 3.68 | 93.85 | 15820 | -- | -- |
| 831.54 | 1.35 | 4.03 | -0.725 | -- | -- | -- | -- | 1.82 | -- | -- | -- | -- | -- |
| 590.23 | 1.14 | 4.01 | -- | 2.15 | -- | -- | -- | 1.86 | 3.73 | -- | -- | -- | -- |
| 687.13 | 1.22 | 4.01 | -- | -- | -1.23 | -- | -- | 1.91 | -- | 74.82 | 14854 | -- | -- |
| 845.42 | 1.36 | 4.01 | -- | -- | -- | -- | -- | 1.9 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 488.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 19 |
| 5 | 488.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 6 | 488.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 9 | 489.09 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 11 | 489.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 21 |
| 12 | 489.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 17 |
| 16 | 489.47 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 18 | 489.52 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 18 | NA |
| 26 | 489.79 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 31 | 489.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 13 |
| 34 | 489.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 10 |
| 36 | 490.01 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 55 | 490.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 57 | 490.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 58 | 490.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 73 | 490.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 79 | 490.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 89 | 490.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 8 | 17 |
| 91 | 490.97 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 20 |
| 105 | 491.19 | humidity | 90.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 168 | 491.98 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 20 |
| 177 | 492.22 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 182 | 492.29 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 196 | 492.47 | humidity | 90.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 202 | 492.53 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 206 | 492.56 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 270 | 493.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 272 | 493.40 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 274 | 493.44 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 18 |
| 281 | 493.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 287 | 493.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 23 | 19 |
| 288 | 493.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 23 | 19 |
| 315 | 493.79 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 324 | 493.84 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 341 | 493.99 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 362 | 494.16 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 373 | 494.24 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 380 | 494.29 | humidity | 90.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 387 | 494.36 | humidity | 90.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 409 | 494.53 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 431 | 494.68 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 438 | 494.74 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 446 | 494.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 468 | 494.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 478 | 495.00 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 480 | 495.01 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 494 | 495.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 499 | 495.14 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 11 | 12 |
| 550 | 495.41 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 570 | 495.55 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 652 | 496.01 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 660 | 496.04 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 680 | 496.13 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 689 | 496.17 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 693 | 496.20 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 695 | 496.22 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 705 | 496.27 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 722 | 496.35 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 777 | 496.61 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 789 | 496.67 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 826 | 496.83 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 844 | 496.91 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 886 | 497.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 925 | 497.17 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 928 | 497.17 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 935 | 497.20 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 942 | 497.24 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 997 | 497.45 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 16 | 22 |