Os03g0140400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0140400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 177.21 | 0.625 | 11.2 | -0.114 | 0.214 | -3.01 | 2.21 | -0.633 | 0.0895 | 5.69 | 0.551 | 1461 | -- | -- |
| 177.38 | 0.62 | 11.2 | -0.179 | 0.221 | -2.86 | 2.22 | -- | 0.0873 | 5.73 | 0.5449 | 1460 | -- | -- |
| 188.94 | 0.64 | 11.2 | -0.0717 | 0.245 | -3.17 | -- | -1.08 | 0.0912 | 4.4 | 0.501 | 1465 | -- | -- |
| 189.29 | 0.641 | 11.2 | -0.166 | 0.248 | -2.91 | -- | -- | 0.0854 | 4.4 | 0.5185 | 1466 | -- | -- |
| 191.77 | 0.645 | 11.2 | -0.0472 | -- | -3.18 | -- | -1.32 | 0.0993 | -- | 0.4525 | 1457 | -- | -- |
| 263.79 | 0.761 | 11.1 | 0.537 | 0.22 | -- | 2.34 | -- | 0.429 | 5.65 | -- | -- | -- | -- |
| 276.55 | 0.779 | 11.1 | 0.552 | 0.259 | -- | -- | -- | 0.421 | 7.29 | -- | -- | -- | -- |
| 192.22 | 0.646 | 11.2 | -0.156 | -- | -2.88 | -- | -- | 0.0851 | -- | 0.5767 | 1460 | -- | -- |
| 189.9 | 0.642 | 11.2 | -- | 0.253 | -2.84 | -- | -- | 0.103 | 4.37 | 0.5577 | 1468 | -- | -- |
| 280.12 | 0.782 | 11.1 | 0.556 | -- | -- | -- | -- | 0.425 | -- | -- | -- | -- | -- |
| 284.57 | 0.789 | 11.2 | -- | 0.265 | -- | -- | -- | 0.359 | 7.15 | -- | -- | -- | -- |
| 192.76 | 0.647 | 11.2 | -- | -- | -2.8 | -- | -- | 0.0975 | -- | 0.5806 | 1458 | -- | -- |
| 288.27 | 0.792 | 11.2 | -- | -- | -- | -- | -- | 0.363 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 179.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 6 | 13 |
| 3 | 179.13 | radiation | 1 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 6 | 179.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 10 | 179.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 14 | 179.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 6 | 19 |
| 26 | 179.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 55 | 179.74 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 60 | 179.74 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 92 | 180.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 96 | 180.26 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 13 |
| 99 | 180.33 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |
| 103 | 180.42 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 134 | 181.47 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 204 | 183.94 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 206 | 183.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 209 | 184.06 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 214 | 184.15 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 218 | 184.19 | radiation | 1 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 228 | 184.19 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 252 | 184.23 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 261 | 184.33 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 265 | 184.43 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 271 | 184.49 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 272 | 184.49 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 284 | 184.50 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 286 | 184.52 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 303 | 184.82 | humidity | 60 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 307 | 184.86 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 321 | 185.06 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 325 | 185.14 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 11 |
| 336 | 185.24 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 339 | 185.25 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 372 | 185.45 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 380 | 185.63 | radiation | 1 | 1440 | > th | dose independent | sin | 22 | NA |
| 381 | 185.64 | humidity | 60 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 382 | 185.69 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 13 |
| 385 | 185.72 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 386 | 185.73 | humidity | 60 | 43200 | < th | dose independent | rect. | 14 | 21 |
| 390 | 185.80 | radiation | 1 | 1440 | < th | dose independent | sin | 15 | NA |
| 411 | 185.92 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 13 |
| 434 | 185.99 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 436 | 186.00 | humidity | 60 | 43200 | > th | dose independent | rect. | 14 | 21 |
| 442 | 186.02 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 15 |
| 451 | 186.06 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 13 |
| 461 | 186.12 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 462 | 186.14 | radiation | 1 | 1440 | > th | dose independent | sin | 15 | NA |
| 467 | 186.17 | humidity | 60 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 470 | 186.22 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 9 |
| 475 | 186.24 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 10 |
| 480 | 186.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 485 | 186.28 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 487 | 186.28 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 21 |
| 488 | 186.29 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 516 | 186.32 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 542 | 186.39 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 566 | 186.47 | humidity | 60 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 575 | 186.51 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 578 | 186.53 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 588 | 186.67 | wind | 7 | 43200 | > th | dose independent | sin | 15 | NA |
| 593 | 186.70 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 594 | 186.71 | wind | 7 | 43200 | < th | dose independent | sin | 15 | NA |
| 602 | 186.78 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 649 | 186.80 | humidity | 60 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 665 | 186.90 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 671 | 186.95 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 677 | 187.00 | humidity | 60 | 43200 | < th | dose independent | rect. | 14 | 17 |
| 682 | 187.01 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 690 | 187.03 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 718 | 187.21 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 719 | 187.21 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 736 | 187.30 | wind | 5 | 43200 | > th | dose dependent | sin | 16 | NA |
| 738 | 187.33 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 745 | 187.37 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 14 |
| 752 | 187.41 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 17 |
| 825 | 187.62 | radiation | 10 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 890 | 187.95 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 17 |
| 917 | 188.10 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 937 | 188.18 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 21 |
| 939 | 188.19 | humidity | 60 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 940 | 188.19 | humidity | 60 | 43200 | < th | dose independent | rect. | 1 | 19 |
| 952 | 188.22 | humidity | 60 | 43200 | < th | dose independent | rect. | 4 | 20 |
| 971 | 188.27 | radiation | 1 | 1440 | > th | dose independent | rect. | 18 | 23 |