Os03g0140300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0140300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 237.55 | 0.724 | 7.19 | -0.816 | 0.8 | 2.97 | -2.1 | -5.37 | -0.509 | 17.8 | 19.53 | 1426 | -- | -- |
| 250.56 | 0.737 | 7.11 | -0.254 | 0.801 | 3.79 | -1.9 | -- | -0.539 | 17.5 | 11.9 | 8308 | -- | -- |
| 247.39 | 0.733 | 7.18 | -0.64 | 0.782 | 3 | -- | -4.82 | -0.469 | 18.2 | 19 | 1449 | -- | -- |
| 259.7 | 0.751 | 7.11 | -0.154 | 0.759 | 3.74 | -- | -- | -0.514 | 17.8 | 12.4 | 8276 | -- | -- |
| 257.1 | 0.747 | 7.17 | -0.667 | -- | 3.36 | -- | -5.03 | -0.472 | -- | 16.94 | 1997 | -- | -- |
| 483.26 | 1.03 | 6.86 | 1.76 | 0.707 | -- | -1.89 | -- | 0.562 | 18.3 | -- | -- | -- | -- |
| 491.02 | 1.04 | 6.86 | 1.78 | 0.708 | -- | -- | -- | 0.553 | 19 | -- | -- | -- | -- |
| 276.51 | 0.774 | 6.99 | 0.48 | -- | 3.44 | -- | -- | -0.0851 | -- | 11.7 | 2070 | -- | -- |
| 260.08 | 0.751 | 7.1 | -- | 0.744 | 3.66 | -- | -- | -0.49 | 18 | 11.76 | 8231 | -- | -- |
| 517.39 | 1.06 | 6.85 | 1.77 | -- | -- | -- | -- | 0.54 | -- | -- | -- | -- | -- |
| 574.81 | 1.12 | 6.91 | -- | 0.689 | -- | -- | -- | 0.355 | 19.2 | -- | -- | -- | -- |
| 280.76 | 0.78 | 7.03 | -- | -- | 3.9 | -- | -- | -0.253 | -- | 12.58 | 2032 | -- | -- |
| 599.92 | 1.14 | 6.89 | -- | -- | -- | -- | -- | 0.344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 226.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 18 |
| 5 | 229.59 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 10 | 231.40 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 22 | 232.31 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 23 | 232.50 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 29 | 234.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 22 |
| 30 | 234.15 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 36 | 234.24 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 40 | 234.50 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 41 | 234.53 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 15 |
| 51 | 235.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 57 | 235.38 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 59 | 235.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 20 |
| 63 | 235.60 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 15 |
| 66 | 235.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 77 | 235.96 | temperature | 25 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 79 | 236.01 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 85 | 236.14 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 105 | 236.52 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 126 | 236.79 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 174 | 237.49 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 181 | 237.53 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 190 | 237.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 20 |
| 239 | 238.11 | wind | 5 | 43200 | < th | dose independent | sin | 17 | NA |
| 295 | 238.41 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 299 | 238.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 322 | 238.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 346 | 238.68 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 384 | 238.82 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 434 | 239.04 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 467 | 239.28 | temperature | 30 | 4320 | < th | dose dependent | rect. | 15 | 16 |
| 573 | 239.67 | wind | 5 | 43200 | > th | dose dependent | sin | 17 | NA |
| 579 | 239.69 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 650 | 239.93 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 696 | 240.05 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 20 |
| 703 | 240.07 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 748 | 240.20 | temperature | 10 | 4320 | > th | dose dependent | sin | 13 | NA |
| 817 | 240.37 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 890 | 240.56 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 11 |
| 954 | 240.70 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 11 |
| 955 | 240.70 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 14 |