Os03g0138600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF810 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0138600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF810 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.5 | 0.643 | 6.53 | 3.09 | 2.99 | -1.46 | -0.106 | 2.48 | 0.409 | 22.9 | 26.7 | 5789 | -- | -- |
| 187.75 | 0.638 | 6.57 | 2.61 | 3.08 | -1.36 | -0.0558 | -- | 0.47 | 22.9 | 23.5 | 8121 | -- | -- |
| 187.55 | 0.638 | 6.53 | 3.1 | 2.99 | -1.46 | -- | 2.48 | 0.409 | 22.9 | 26.7 | 5789 | -- | -- |
| 187.2 | 0.637 | 6.56 | 2.54 | 3.04 | -1.31 | -- | -- | 0.495 | 22.9 | 23.5 | 8142 | -- | -- |
| 637.42 | 1.18 | 6.54 | 2.35 | -- | -1.33 | -- | 0.745 | 0.21 | -- | 27.2 | 1546 | -- | -- |
| 244.4 | 0.733 | 6.68 | 1.83 | 2.97 | -- | -0.218 | -- | -0.0605 | 22.8 | -- | -- | -- | -- |
| 244.6 | 0.732 | 6.68 | 1.84 | 2.97 | -- | -- | -- | -0.0599 | 22.8 | -- | -- | -- | -- |
| 638.73 | 1.18 | 6.56 | 2.21 | -- | -1.3 | -- | -- | 0.17 | -- | 27.2 | 1546 | -- | -- |
| 315.41 | 0.827 | 6.7 | -- | 3 | -0.622 | -- | -- | -0.0739 | 22.8 | 28.4 | 7405 | -- | -- |
| 789.82 | 1.31 | 6.61 | 1.9 | -- | -- | -- | -- | -0.0408 | -- | -- | -- | -- | -- |
| 333.7 | 0.855 | 6.73 | -- | 2.98 | -- | -- | -- | -0.265 | 22.9 | -- | -- | -- | -- |
| 765.58 | 1.29 | 6.62 | -- | -- | -1.15 | -- | -- | -0.0963 | -- | 27.2 | 1546 | -- | -- |
| 885.1 | 1.39 | 6.66 | -- | -- | -- | -- | -- | -0.252 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.62 | radiation | 20 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 2 | 182.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 4 |
| 4 | 182.64 | radiation | 20 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 5 | 182.65 | radiation | 20 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 7 | 182.66 | radiation | 20 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 10 | 182.67 | radiation | 20 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 18 | 183.28 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 38 | 184.08 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 44 | 184.57 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 59 | 184.77 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 61 | 184.94 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 63 | 185.01 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 65 | 185.07 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 106 | 185.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 131 | 185.92 | radiation | 20 | 43200 | < th | dose independent | sin | 11 | NA |
| 145 | 185.98 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 21 |
| 165 | 186.21 | radiation | 10 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 169 | 186.34 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 185 | 186.48 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 186 | 186.48 | radiation | 10 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 190 | 186.50 | radiation | 40 | 43200 | < th | dose independent | rect. | 22 | 13 |
| 195 | 186.51 | radiation | 40 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 198 | 186.51 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 200 | 186.52 | radiation | 40 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 206 | 186.59 | radiation | 40 | 43200 | < th | dose independent | sin | 11 | NA |
| 224 | 186.75 | radiation | 40 | 43200 | > th | dose dependent | sin | 11 | NA |
| 253 | 186.93 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 284 | 187.07 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 288 | 187.21 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 14 |
| 290 | 187.22 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 297 | 187.25 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 303 | 187.26 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 322 | 187.46 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 328 | 187.60 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 330 | 187.62 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 351 | 187.74 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 361 | 187.84 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 364 | 187.87 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 379 | 188.12 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 404 | 188.30 | radiation | 40 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 405 | 188.31 | radiation | 40 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 408 | 188.32 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 10 |
| 409 | 188.32 | radiation | 40 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 423 | 188.36 | radiation | 40 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 443 | 188.51 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 445 | 188.51 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 454 | 188.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 476 | 188.63 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 485 | 188.63 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 506 | 188.70 | temperature | 20 | 10 | > th | dose dependent | sin | 6 | NA |
| 513 | 188.72 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 527 | 188.79 | radiation | 40 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 568 | 188.87 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 581 | 188.93 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 602 | 189.07 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 607 | 189.09 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 620 | 189.14 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 699 | 189.38 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 704 | 189.40 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 718 | 189.47 | radiation | 20 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 719 | 189.47 | radiation | 20 | 43200 | < th | dose independent | rect. | 14 | 14 |
| 720 | 189.48 | radiation | 20 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 726 | 189.49 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 727 | 189.49 | radiation | 20 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 733 | 189.49 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 4 |
| 741 | 189.54 | humidity | 90 | 43200 | > th | dose independent | sin | 14 | NA |
| 759 | 189.63 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 770 | 189.72 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 13 |
| 771 | 189.73 | humidity | 90 | 43200 | < th | dose independent | sin | 15 | NA |
| 830 | 189.97 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 877 | 190.01 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 888 | 190.05 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 898 | 190.09 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 928 | 190.15 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 931 | 190.16 | radiation | 10 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 937 | 190.19 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 997 | 190.30 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |