Os03g0138200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os03g0138200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 282.56 | 0.79 | 2.83 | -0.453 | 0.0318 | -0.285 | -0.57 | -4.55 | 0.000636 | 6.02 | 9.1 | 4373 | -- | -- |
| 292.62 | 0.797 | 2.94 | -0.365 | 0.0125 | 0.269 | -0.734 | -- | -0.117 | 6.23 | 8.001 | 4426 | -- | -- |
| 283.28 | 0.784 | 2.83 | -0.44 | 0.0432 | -0.276 | -- | -4.57 | 0.0241 | 8.85 | 9.079 | 4372 | -- | -- |
| 292.15 | 0.796 | 2.94 | -0.221 | 0.0266 | 0.45 | -- | -- | -0.0903 | 6.16 | 8.1 | 4373 | -- | -- |
| 283.4 | 0.784 | 2.83 | -0.445 | -- | -0.263 | -- | -4.49 | 0.00273 | -- | 9.091 | 4372 | -- | -- |
| 296.28 | 0.807 | 2.94 | -0.375 | 0.0547 | -- | -0.607 | -- | -0.0973 | 6.68 | -- | -- | -- | -- |
| 297.13 | 0.807 | 2.94 | -0.383 | 0.062 | -- | -- | -- | -0.0949 | 8.96 | -- | -- | -- | -- |
| 292.18 | 0.796 | 2.94 | -0.222 | -- | 0.453 | -- | -- | -0.0914 | -- | 8.099 | 4373 | -- | -- |
| 293.32 | 0.798 | 2.94 | -- | 0.0352 | 0.523 | -- | -- | -0.0755 | 5.88 | 8.098 | 4373 | -- | -- |
| 297.35 | 0.806 | 2.94 | -0.383 | -- | -- | -- | -- | -0.0945 | -- | -- | -- | -- | -- |
| 301.01 | 0.812 | 2.93 | -- | 0.0619 | -- | -- | -- | -0.0522 | 9.43 | -- | -- | -- | -- |
| 293.32 | 0.798 | 2.94 | -- | -- | 0.526 | -- | -- | -0.0679 | -- | 8.066 | 4373 | -- | -- |
| 301.23 | 0.81 | 2.93 | -- | -- | -- | -- | -- | -0.052 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 269.61 | wind | 9 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 2 | 270.99 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 4 | 271.06 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 7 | 271.32 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 9 |
| 14 | 271.66 | wind | 9 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 19 | 271.86 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 29 | 271.86 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 43 | 273.29 | wind | 9 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 48 | 273.80 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 57 | 275.99 | atmosphere | 1010 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 65 | 276.07 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 192 | 278.02 | atmosphere | 1010 | 30 | > th | dose dependent | sin | 0 | NA |
| 193 | 278.09 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 1 |
| 194 | 278.09 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 600 | 279.97 | humidity | 50 | 10 | > th | dose independent | sin | 8 | NA |
| 604 | 280.05 | humidity | 50 | 10 | > th | dose independent | sin | 5 | NA |
| 623 | 280.24 | humidity | 80 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 634 | 280.54 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 651 | 280.66 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 653 | 280.67 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 663 | 280.81 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 12 |
| 684 | 281.04 | wind | 9 | 4320 | > th | dose independent | sin | 20 | NA |
| 696 | 281.19 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 697 | 281.19 | wind | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 701 | 281.24 | wind | 7 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 708 | 281.28 | humidity | 60 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 710 | 281.28 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 725 | 281.42 | wind | 9 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 758 | 281.58 | wind | 9 | 4320 | < th | dose independent | sin | 20 | NA |
| 759 | 281.58 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 819 | 281.93 | wind | 9 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 837 | 282.02 | wind | 9 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 843 | 282.05 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 847 | 282.05 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 900 | 282.05 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 904 | 282.05 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 956 | 282.06 | wind | 9 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 965 | 282.07 | humidity | 50 | 10 | < th | dose dependent | rect. | 13 | 4 |
| 976 | 282.14 | wind | 1 | 14400 | < th | dose dependent | rect. | 12 | 6 |
| 985 | 282.19 | humidity | 50 | 10 | < th | dose independent | rect. | 13 | 4 |
| 989 | 282.21 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 1 |