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Os03g0136700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to DYW10 protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.37 (0.0281) R2 : 0.915
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.47 (0.0878) R2dC : 0.446 R2C : 0.74
β3 : -1.87 (0.0841) R2dE : 0.141 R2E : 0.435
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.633 (0.0593) R2dN8 : 0.0275 R2N8 : 0.0329
σ : 0.528
deviance : 128.52
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_____
C
peak time of C : 15.5
E
wheather : precipitation
threshold : 0.4998
memory length : 84
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.02
open length of G : 4.14

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
120.79 0.516 9.37 0.119 3.45 -1.91 -1.77 -1.16 -0.62 15.5 0.2951 87 3.02 4.15
123.52 0.518 9.36 0.215 3.4 -1.94 -1.6 -- -0.599 15.4 0.5 81 3.03 4.22
127.84 0.527 9.37 0.156 3.47 -1.88 -- -0.0995 -0.615 15.5 0.3128 85 3.03 4.14
127.83 0.527 9.37 0.162 3.47 -1.88 -- -- -0.614 15.5 0.4091 84 3.02 4.13
518.21 1.06 9.33 0.172 -- -3.64 -- -0.12 -0.532 -- 1.198 50 2.57 5.05
234.33 0.718 9.41 0.0828 4.76 -- -0.784 -- -0.691 16.1 -- -- -- --
236.06 0.72 9.41 0.0738 4.75 -- -- -- -0.695 16.1 -- -- -- --
518.13 1.06 9.32 0.158 -- -3.63 -- -- -0.533 -- 1.046 50 2.55 5.06
128.52 0.528 9.37 -- 3.47 -1.87 -- -- -0.633 15.5 0.4998 84 3.02 4.14
1462.91 1.79 9.39 -0.119 -- -- -- -- -0.822 -- -- -- -- --
236.21 0.719 9.41 -- 4.75 -- -- -- -0.703 16.1 -- -- -- --
518.79 1.06 9.33 -- -- -3.63 -- -- -0.547 -- 1.032 51 2.53 5.07
1463.28 1.79 9.39 -- -- -- -- -- -0.809 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 121.52 wind 5.0 90 < th dose independent rect. 3 4
2 121.65 precipitation 0.1 90 < th dose independent rect. 3 4
3 121.65 precipitation 0.1 90 < th dose dependent rect. 3 4
4 122.18 wind 9.0 90 < th dose dependent rect. 3 4
5 122.22 humidity 70.0 90 > th dose independent rect. 3 4
7 122.72 radiation 20.0 90 < th dose independent rect. 3 4
10 123.02 temperature 10.0 90 > th dose independent rect. 3 4
12 123.02 temperature 30.0 90 < th dose independent rect. 3 4
13 123.02 humidity 50.0 90 > th dose independent rect. 3 4
15 123.02 atmosphere 995.0 90 > th dose independent rect. 3 4
16 123.02 atmosphere 1015.0 90 < th dose independent rect. 3 4
18 123.02 temperature 10.0 90 > th dose independent rect. 7 20
20 123.23 precipitation 0.1 270 < th dose independent rect. 1 5
21 123.23 precipitation 0.1 270 < th dose dependent rect. 1 5
22 123.27 wind 9.0 90 < th dose independent rect. 7 20
23 123.91 precipitation 0.1 90 < th dose independent rect. 7 20
24 123.91 precipitation 0.1 90 < th dose dependent rect. 7 20
28 124.20 wind 7.0 270 < th dose independent rect. 1 5
29 124.21 atmosphere 1010.0 270 < th dose independent rect. 1 5
30 124.31 radiation 10.0 270 < th dose independent rect. 1 5
36 124.86 temperature 10.0 270 > th dose independent rect. 1 5
38 124.86 temperature 30.0 270 < th dose independent rect. 1 5
39 124.86 humidity 50.0 270 > th dose independent rect. 1 5
42 124.86 atmosphere 995.0 270 > th dose independent rect. 1 5
48 125.02 radiation 40.0 270 < th dose dependent rect. 1 5
52 125.34 wind 9.0 270 < th dose independent rect. 5 21
54 125.59 precipitation 0.1 270 < th dose independent rect. 3 1
55 125.59 precipitation 0.1 270 < th dose dependent rect. 3 1
56 125.82 radiation 40.0 90 < th dose dependent rect. 3 4
58 126.10 wind 5.0 270 < th dose independent rect. 3 1
59 126.18 precipitation 0.1 270 < th dose independent rect. 5 21
60 126.18 precipitation 0.1 270 < th dose dependent rect. 5 21
74 126.31 temperature 10.0 270 > th dose independent rect. 5 21
78 126.38 radiation 1.0 270 < th dose independent rect. 2 3
84 126.67 humidity 50.0 90 > th dose dependent rect. 3 4
85 126.94 radiation 30.0 90 < th dose dependent rect. 3 6
91 127.90 wind 9.0 270 < th dose dependent rect. 1 5
94 128.05 temperature 10.0 270 > th dose independent rect. 3 1
96 128.05 temperature 30.0 270 < th dose independent rect. 3 1
97 128.05 humidity 50.0 270 > th dose independent rect. 3 1
100 128.05 atmosphere 995.0 270 > th dose independent rect. 3 1
101 128.05 atmosphere 1010.0 270 < th dose independent rect. 3 1
103 128.05 radiation 1.0 270 < th dose independent rect. 3 1
108 128.05 temperature 10.0 270 > th dose independent rect. 4 23
109 128.05 radiation 1.0 270 < th dose dependent rect. 3 1
117 128.68 radiation 20.0 90 < th dose independent rect. 3 6
120 128.97 temperature 10.0 90 > th dose dependent rect. 3 4
122 129.02 wind 1.0 270 > th dose independent rect. 3 1
129 129.44 wind 9.0 270 < th dose dependent rect. 3 1
134 129.86 temperature 10.0 270 > th dose dependent rect. 1 5
169 130.53 humidity 50.0 270 > th dose dependent rect. 1 5
171 130.63 wind 9.0 10 < th dose dependent rect. 3 5
175 130.76 temperature 10.0 270 > th dose dependent rect. 3 2
205 132.27 humidity 50.0 270 > th dose dependent rect. 3 1
211 132.40 temperature 15.0 270 > th dose independent rect. 11 10
222 133.03 radiation 30.0 10 < th dose independent rect. 3 5
223 133.05 radiation 30.0 90 < th dose dependent rect. 3 8
241 133.70 humidity 70.0 10 > th dose independent rect. 3 5
291 134.59 atmosphere 995.0 90 > th dose independent rect. 7 20
299 134.80 wind 5.0 10 < th dose independent rect. 3 5
303 134.92 precipitation 0.1 10 < th dose independent rect. 3 5
304 134.92 precipitation 0.1 10 < th dose dependent rect. 3 5
313 135.18 wind 1.0 270 > th dose independent rect. 2 3
353 136.29 wind 1.0 270 > th dose independent rect. 1 5
355 136.37 temperature 15.0 270 > th dose independent rect. 24 22
365 136.68 precipitation 0.1 10 < th dose independent rect. 8 19
366 136.68 precipitation 0.1 10 < th dose dependent rect. 8 19
368 136.72 wind 9.0 10 < th dose independent rect. 8 19
371 136.75 temperature 10.0 10 > th dose independent rect. 3 5
373 136.75 temperature 30.0 10 < th dose independent rect. 3 5
374 136.75 humidity 50.0 10 > th dose independent rect. 3 5
376 136.75 atmosphere 995.0 10 > th dose independent rect. 3 5
377 136.75 atmosphere 1015.0 10 < th dose independent rect. 3 5
378 136.75 temperature 10.0 10 > th dose independent rect. 8 19
397 137.38 radiation 40.0 10 < th dose dependent rect. 3 5
417 137.67 atmosphere 1015.0 90 < th dose dependent rect. 3 4
422 137.85 humidity 50.0 10 > th dose dependent rect. 3 5
494 138.64 atmosphere 1010.0 270 < th dose independent rect. 11 10
499 138.76 radiation 1.0 270 < th dose dependent rect. 2 16
539 139.68 radiation 1.0 270 < th dose independent rect. 1 16
545 139.80 radiation 1.0 270 < th dose dependent rect. 1 18
556 139.88 radiation 1.0 270 < th dose independent rect. 1 14
558 139.92 radiation 1.0 270 < th dose independent rect. 1 11
559 139.92 temperature 15.0 90 > th dose independent rect. 3 18
576 140.33 wind 1.0 270 > th dose independent rect. 6 19
603 140.77 temperature 10.0 10 > th dose dependent rect. 3 5
632 141.37 atmosphere 995.0 90 > th dose dependent rect. 3 4
679 141.80 radiation 20.0 90 < th dose dependent rect. 3 10
685 141.96 humidity 50.0 90 > th dose dependent rect. 21 6
694 142.18 wind 9.0 90 < th dose dependent rect. 7 20
708 142.43 temperature 15.0 270 > th dose independent rect. 14 16
730 143.38 wind 7.0 90 < th dose independent rect. 21 6
734 143.56 precipitation 0.1 90 < th dose independent rect. 21 6
735 143.56 precipitation 0.1 90 < th dose dependent rect. 21 6
737 143.70 radiation 40.0 270 < th dose dependent rect. 15 15
739 143.71 temperature 10.0 270 > th dose independent rect. 21 14
740 143.71 atmosphere 995.0 270 > th dose independent rect. 21 14
750 143.94 temperature 10.0 90 > th dose independent rect. 21 6
751 143.94 temperature 30.0 90 < th dose independent rect. 21 6
752 143.94 humidity 50.0 90 > th dose independent rect. 21 6
755 143.94 atmosphere 995.0 90 > th dose independent rect. 21 6
756 143.94 radiation 1.0 90 < th dose independent rect. 21 6
763 143.94 atmosphere 1015.0 90 < th dose independent rect. 3 18
764 143.94 radiation 1.0 90 < th dose dependent rect. 21 6
770 143.97 wind 9.0 270 < th dose independent rect. 21 14
789 144.17 humidity 50.0 270 > th dose independent rect. 21 14
791 144.20 atmosphere 995.0 270 > th dose dependent rect. 3 1
803 144.53 wind 9.0 90 < th dose dependent rect. 21 6
821 144.76 atmosphere 1015.0 1440 < th dose independent rect. 3 6
833 144.81 precipitation 0.1 270 < th dose independent rect. 19 6
834 144.81 precipitation 0.1 270 < th dose dependent rect. 19 6
841 145.00 temperature 30.0 90 < th dose dependent rect. 3 4
842 145.01 wind 7.0 270 < th dose independent rect. 19 6
852 145.30 atmosphere 995.0 270 > th dose independent rect. 5 21
868 145.39 wind 9.0 90 < th dose independent rect. 3 18
881 145.79 temperature 10.0 270 > th dose independent rect. 19 6
882 145.79 temperature 30.0 270 < th dose independent rect. 19 6
883 145.79 humidity 50.0 270 > th dose independent rect. 19 6
884 145.79 atmosphere 995.0 270 > th dose independent rect. 19 6
885 145.79 radiation 1.0 270 < th dose independent rect. 19 6
891 145.79 atmosphere 1015.0 270 < th dose independent rect. 1 18
892 145.79 radiation 1.0 270 < th dose dependent rect. 19 6
926 146.04 precipitation 0.1 270 < th dose independent rect. 1 18
927 146.04 precipitation 0.1 270 < th dose dependent rect. 1 18
933 146.24 atmosphere 995.0 10 > th dose dependent rect. 3 4
955 146.71 wind 9.0 1440 < th dose independent rect. 4 4
956 146.71 temperature 10.0 1440 > th dose independent rect. 4 4
959 146.71 temperature 30.0 1440 < th dose independent rect. 4 4
963 146.71 humidity 50.0 1440 > th dose independent rect. 4 4
968 146.71 atmosphere 995.0 1440 > th dose independent rect. 4 4
969 146.71 atmosphere 1015.0 1440 < th dose independent rect. 4 4
971 146.71 temperature 10.0 1440 > th dose independent rect. 8 20
986 146.91 precipitation 0.1 90 < th dose independent rect. 3 18
987 146.91 precipitation 0.1 90 < th dose dependent rect. 3 18