Os03g0136500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0136500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.95 | 0.412 | 10.9 | 0.278 | 0.326 | 0.443 | 0.143 | -0.424 | 0.363 | 21.9 | 20.04 | 9 | -- | -- |
| 77.52 | 0.41 | 10.9 | 0.342 | 0.319 | 0.519 | 0.215 | -- | 0.381 | 22 | 19.64 | 10 | -- | -- |
| 77.01 | 0.409 | 10.9 | 0.265 | 0.325 | 0.447 | -- | -0.455 | 0.36 | 22.1 | 20.01 | 8 | -- | -- |
| 77.59 | 0.41 | 10.9 | 0.323 | 0.318 | 0.531 | -- | -- | 0.379 | 22.3 | 19.62 | 27 | -- | -- |
| 82.9 | 0.424 | 10.9 | 0.293 | -- | 0.418 | -- | -0.374 | 0.38 | -- | 19.7 | 34 | -- | -- |
| 86.25 | 0.435 | 10.9 | 0.485 | 0.258 | -- | 0.583 | -- | 0.464 | 20.3 | -- | -- | -- | -- |
| 87.13 | 0.437 | 10.9 | 0.465 | 0.258 | -- | -- | -- | 0.463 | 21.1 | -- | -- | -- | -- |
| 81.34 | 0.42 | 10.9 | 0.276 | -- | 0.572 | -- | -- | 0.352 | -- | 20.11 | 411 | -- | -- |
| 80.16 | 0.417 | 10.9 | -- | 0.319 | 0.6 | -- | -- | 0.349 | 22.5 | 19.7 | 37 | -- | -- |
| 90.95 | 0.446 | 10.9 | 0.466 | -- | -- | -- | -- | 0.462 | -- | -- | -- | -- | -- |
| 92.83 | 0.451 | 10.9 | -- | 0.257 | -- | -- | -- | 0.411 | 21.2 | -- | -- | -- | -- |
| 82.94 | 0.424 | 10.9 | -- | -- | 0.716 | -- | -- | 0.315 | -- | 19.7 | 423 | -- | -- |
| 96.67 | 0.459 | 10.9 | -- | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.81 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 2 | 70.84 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 3 | 70.89 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 7 | 71.06 | radiation | 10 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 11 | 71.12 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 14 | 71.31 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 22 | 71.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 18 |
| 23 | 71.52 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 27 | 71.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 19 |
| 34 | 71.61 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 21 |
| 42 | 71.63 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 14 |
| 49 | 71.66 | humidity | 80 | 14400 | > th | dose dependent | rect. | 8 | 14 |
| 58 | 71.68 | humidity | 80 | 14400 | > th | dose dependent | sin | 22 | NA |
| 73 | 71.71 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 78 | 71.71 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 9 |
| 81 | 71.72 | radiation | 10 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 174 | 71.90 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 18 |
| 175 | 71.90 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 22 |
| 176 | 71.90 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 186 | 71.92 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 189 | 71.92 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 192 | 71.92 | humidity | 90 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 204 | 71.94 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 207 | 71.95 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 227 | 71.97 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 248 | 72.00 | wind | 3 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 249 | 72.00 | humidity | 80 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 267 | 72.02 | humidity | 90 | 14400 | > th | dose independent | sin | 18 | NA |
| 306 | 72.06 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 310 | 72.07 | humidity | 90 | 14400 | > th | dose independent | rect. | 12 | 13 |
| 318 | 72.07 | humidity | 80 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 338 | 72.09 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 362 | 72.12 | humidity | 90 | 14400 | > th | dose independent | sin | 3 | NA |
| 375 | 72.14 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 388 | 72.15 | humidity | 80 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 391 | 72.16 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 442 | 72.21 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 468 | 72.25 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 584 | 72.38 | humidity | 90 | 14400 | < th | dose independent | sin | 23 | NA |
| 590 | 72.38 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 645 | 72.44 | humidity | 80 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 679 | 72.48 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 693 | 72.49 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 704 | 72.50 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 721 | 72.52 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 751 | 72.56 | humidity | 90 | 14400 | < th | dose independent | rect. | 11 | 12 |
| 770 | 72.58 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 773 | 72.58 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 834 | 72.65 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 835 | 72.65 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 905 | 72.71 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 917 | 72.72 | humidity | 90 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 925 | 72.73 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 23 |
| 930 | 72.74 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 962 | 72.76 | humidity | 90 | 14400 | < th | dose independent | rect. | 11 | 23 |