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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0135100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glutathione S-transferase GSTF15.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.65 (0.0402) R2 : 0.453
β1 : -2.4 (0.173) R2dD : 0.354 R2D : 0.164
β2 : -- (--) R2dC : -- R2C : --
β3 : 0.603 (0.116) R2dE : 0.0422 R2E : 0.101
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -7.29 (0.852) R2dD*E : 0.139 R2D*E : -0.039
γ1 : 0.323 (0.0981) R2dN8 : 0.0243 R2N8 : 0.0973
σ : 0.727
deviance : 243.89
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 25.13
memory length : 16
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 22
open length of G : 11.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
238.54 0.726 3.63 -2.36 0.346 0.467 -0.197 -7.14 0.383 6.1 25.17 22 22 11.2
275.01 0.778 3.59 -1.56 0.449 0.473 -0.861 -- 0.668 6.15 25.17 22 22 11.2
238.63 0.719 3.63 -2.37 0.344 0.469 -- -7.2 0.38 6.02 25.16 21 22 11.2
275.96 0.774 3.59 -1.6 0.421 0.526 -- -- 0.638 5.89 25.3 15 21.9 11.1
243.89 0.727 3.65 -2.4 -- 0.603 -- -7.29 0.323 -- 25.13 16 22 11.4
284.6 0.791 3.56 -1.53 0.569 -- -0.99 -- 0.817 5.83 -- -- -- --
287 0.793 3.56 -1.54 0.564 -- -- -- 0.821 5.82 -- -- -- --
280.25 0.783 3.63 -1.56 -- 0.708 -- -- 0.547 -- 25.1 7 22.5 11.4
340.05 0.859 3.57 -- 0.365 0.518 -- -- 0.792 6.42 25.11 21 22 11.6
303.49 0.814 3.56 -1.52 -- -- -- -- 0.834 -- -- -- -- --
349.5 0.875 3.52 -- 0.54 -- -- -- 0.993 5.95 -- -- -- --
344.24 0.867 3.59 -- -- 0.662 -- -- 0.738 -- 25.1 7 22.5 11.4
364.64 0.891 3.53 -- -- -- -- -- 1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 241.65 temperature 25 14400 > th dose dependent rect. 4 3
2 241.81 temperature 25 14400 < th dose independent rect. 22 8
4 241.82 temperature 25 30 > th dose independent rect. 22 11
7 242.02 temperature 25 14400 < th dose independent rect. 22 5
12 242.12 temperature 30 14400 > th dose independent rect. 18 16
13 242.12 temperature 30 14400 > th dose dependent rect. 18 16
18 242.28 temperature 30 14400 > th dose dependent rect. 8 3
49 242.36 temperature 30 14400 > th dose independent rect. 18 1
65 242.44 temperature 30 14400 > th dose independent rect. 8 2
81 242.47 temperature 30 14400 < th dose independent rect. 18 16
87 242.57 temperature 30 14400 < th dose independent rect. 8 1
90 242.58 temperature 25 14400 < th dose independent rect. 2 5
93 242.65 temperature 30 14400 < th dose independent rect. 20 13
95 242.70 temperature 30 14400 > th dose dependent sin 9 NA
112 242.75 temperature 25 14400 > th dose independent rect. 21 10
124 242.78 temperature 30 14400 > th dose dependent rect. 17 20
125 242.80 temperature 30 14400 < th dose independent rect. 2 8
150 242.89 temperature 30 14400 < th dose independent rect. 5 6
163 242.91 temperature 25 14400 > th dose independent rect. 22 3
213 243.17 temperature 30 14400 > th dose independent sin 9 NA
215 243.18 temperature 25 14400 > th dose dependent rect. 21 1
224 243.26 temperature 30 14400 < th dose independent sin 9 NA
225 243.29 temperature 25 14400 > th dose independent rect. 5 1
247 243.38 temperature 30 14400 < th dose independent rect. 18 10
252 243.41 temperature 30 14400 < th dose independent rect. 18 12
256 243.44 temperature 25 14400 < th dose independent rect. 4 3
316 243.61 temperature 25 14400 < th dose independent rect. 5 1
326 243.64 temperature 30 14400 > th dose dependent rect. 12 1
332 243.69 temperature 30 14400 < th dose independent rect. 18 7
350 243.84 temperature 30 14400 < th dose independent rect. 18 4
352 243.85 temperature 30 14400 < th dose independent rect. 18 1
370 243.87 temperature 25 14400 < th dose independent rect. 1 2
443 244.27 temperature 25 10 > th dose independent rect. 18 15
490 244.59 temperature 30 14400 > th dose dependent rect. 18 1
506 244.61 temperature 30 14400 > th dose dependent no NA NA
507 244.61 temperature 30 14400 > th dose dependent rect. 8 11
666 244.76 temperature 30 14400 > th dose dependent rect. 12 23
797 245.28 temperature 30 14400 > th dose dependent rect. 16 3