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Os03g0130100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Acyl-activating enzyme 11.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.93 (0.0555) R2 : 0.646
β1 : -1.94 (0.202) R2dD : 0.0771 R2D : 0.0849
β2 : 2.06 (0.13) R2dC : 0.195 R2C : 0.189
β3 : -3.19 (0.213) R2dE : 0.214 R2E : 0.238
β4 : -3.89 (0.497) R2dD*C : 0.0487 R2D*C : 0.0503
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.728 (0.123) R2dN8 : 0.0453 R2N8 : 0.0995
σ : 1.02
deviance : 481.76
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C
peak time of C : 11.2
E
wheather : radiation
threshold : 0.9509
memory length : 4353
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 1.89
open length of G : 4.12

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
479.22 1.03 7.96 -2.38 2.07 -3.17 -3.91 1.86 0.67 11.2 0.9733 4346 1.97 4.03
481.76 1.02 7.93 -1.94 2.06 -3.19 -3.89 -- 0.728 11.2 0.9509 4353 1.89 4.12
540.1 1.08 7.97 -2.39 2.1 -3.17 -- 1.89 0.699 10.9 0.9924 4350 1.83 4.04
542.06 1.08 7.92 -1.95 2.12 -3.4 -- -- 0.791 10.7 0.9521 4359 1.8 4.13
797.16 1.31 7.96 -2.29 -- -3.28 -- 2.19 0.697 -- 1.081 4356 1.78 4.05
739.05 1.27 7.8 -1.62 2.06 -- -4.12 -- 1.37 11.5 -- -- -- --
811.42 1.33 7.81 -1.79 2.08 -- -- -- 1.35 11.3 -- -- -- --
776.29 1.3 8.03 -1.84 -- -3.74 -- -- 0.673 -- 0.819 4368 0.305 5.45
599.75 1.14 7.8 -- 2.12 -3.71 -- -- 1.28 10.4 1.207 4343 1.27 4.3
1082.6 1.54 7.86 -1.84 -- -- -- -- 1.33 -- -- -- -- --
895.92 1.4 7.76 -- 2.1 -- -- -- 1.55 11.3 -- -- -- --
816.67 1.33 7.85 -- -- -4.1 -- -- 1.47 -- 1.14 4348 0.0166 5.45
1172.18 1.6 7.81 -- -- -- -- -- 1.54 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 481.94 atmosphere 1010 14400 < th dose independent rect. 9 2
2 482.18 atmosphere 1010 14400 > th dose independent rect. 8 3
3 482.47 atmosphere 1010 14400 > th dose independent rect. 9 1
4 482.54 atmosphere 1010 14400 < th dose independent rect. 8 4
94 488.64 atmosphere 1010 14400 < th dose independent sin 2 NA
95 488.66 atmosphere 1010 14400 > th dose independent sin 1 NA
203 491.07 atmosphere 1005 14400 > th dose dependent rect. 3 2
211 491.28 atmosphere 1010 14400 > th dose dependent rect. 11 1
212 491.28 atmosphere 1010 14400 > th dose dependent rect. 7 5
354 492.98 atmosphere 1010 14400 > th dose dependent sin 1 NA
473 493.87 atmosphere 1010 14400 < th dose independent rect. 19 21
498 494.02 atmosphere 1015 43200 < th dose independent rect. 14 2
519 494.13 atmosphere 1015 43200 > th dose independent rect. 12 6
520 494.14 atmosphere 1015 43200 > th dose independent rect. 13 3
526 494.18 atmosphere 1015 43200 < th dose independent rect. 13 5
548 494.36 atmosphere 1010 14400 < th dose independent no NA NA
550 494.37 radiation 10 43200 < th dose independent rect. 13 2
573 494.51 atmosphere 1010 14400 < th dose independent rect. 15 23
577 494.53 atmosphere 1015 43200 < th dose independent rect. 12 7
582 494.55 atmosphere 1010 14400 < th dose independent rect. 13 23
628 494.82 atmosphere 1010 14400 > th dose independent rect. 19 22
707 495.24 atmosphere 1010 14400 > th dose independent no NA NA
765 495.50 atmosphere 1010 14400 > th dose independent rect. 13 23
772 495.51 atmosphere 1010 14400 > th dose dependent rect. 15 23
778 495.52 atmosphere 1010 14400 > th dose dependent rect. 6 23
780 495.53 atmosphere 1010 14400 > th dose dependent no NA NA
851 495.74 atmosphere 1010 14400 > th dose dependent rect. 11 23
921 495.97 atmosphere 1005 14400 > th dose dependent rect. 16 15