Os03g0129900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NADH-ubiquinone oxidoreductase B18 subunit family protein.
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Os03g0129900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NADH-ubiquinone oxidoreductase B18 subunit family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.72 | 0.234 | 12.3 | -0.384 | 0.501 | 0.783 | 0.643 | -0.366 | -0.0549 | 7.64 | 24.66 | 4455 | -- | -- |
| 24.79 | 0.232 | 12.3 | -0.31 | 0.492 | 0.754 | 0.624 | -- | -0.0586 | 7.58 | 24.2 | 4463 | -- | -- |
| 25.7 | 0.236 | 12.3 | -0.357 | 0.509 | 0.771 | -- | -0.311 | -0.0582 | 7.21 | 24.5 | 4480 | -- | -- |
| 25.74 | 0.236 | 12.3 | -0.281 | 0.514 | 0.74 | -- | -- | -0.0396 | 7.2 | 24.54 | 4480 | -- | -- |
| 39.03 | 0.291 | 12.3 | -0.322 | -- | 0.744 | -- | -0.0986 | -0.0931 | -- | 22.89 | 4378 | -- | -- |
| 41.58 | 0.302 | 12.3 | -0.0317 | 0.502 | -- | 0.57 | -- | 0.0112 | 7.32 | -- | -- | -- | -- |
| 42.31 | 0.305 | 12.3 | -0.0212 | 0.509 | -- | -- | -- | 0.00907 | 6.95 | -- | -- | -- | -- |
| 39.04 | 0.291 | 12.3 | -0.3 | -- | 0.737 | -- | -- | -0.0902 | -- | 22.8 | 4375 | -- | -- |
| 27.38 | 0.244 | 12.3 | -- | 0.508 | 0.663 | -- | -- | 0.03 | 7.2 | 26 | 4484 | -- | -- |
| 55.9 | 0.349 | 12.3 | -0.0107 | -- | -- | -- | -- | 0.0186 | -- | -- | -- | -- | -- |
| 42.33 | 0.304 | 12.3 | -- | 0.508 | -- | -- | -- | 0.0114 | 6.95 | -- | -- | -- | -- |
| 40.51 | 0.296 | 12.3 | -- | -- | 0.556 | -- | -- | 0.0377 | -- | 27.8 | 5762 | -- | -- |
| 55.91 | 0.349 | 12.3 | -- | -- | -- | -- | -- | 0.0197 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.55 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 3 | 23.75 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 7 | 23.78 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 8 | 23.83 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 10 | 23.86 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 12 | 23.89 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 20 | 23.99 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 35 | 24.09 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 42 | 24.16 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 44 | 24.16 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 52 | 24.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 65 | 24.25 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 70 | 24.30 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 71 | 24.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 73 | 24.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 74 | 24.32 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 88 | 24.34 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 105 | 24.44 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 15 |
| 107 | 24.45 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 6 | NA |
| 112 | 24.48 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 13 |
| 128 | 24.54 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 9 |
| 133 | 24.54 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 151 | 24.59 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 6 |
| 190 | 24.68 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 251 | 24.80 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 278 | 24.86 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 20 |
| 281 | 24.86 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 22 |
| 282 | 24.86 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 312 | 24.89 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 314 | 24.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 338 | 24.91 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 339 | 24.91 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 15 |
| 359 | 24.93 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 375 | 24.94 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 410 | 24.97 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 435 | 25.03 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 436 | 25.03 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 458 | 25.06 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 588 | 25.25 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 614 | 25.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 625 | 25.28 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 672 | 25.31 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 713 | 25.34 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 4 |
| 737 | 25.35 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 4 |
| 798 | 25.38 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 828 | 25.38 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 830 | 25.39 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 833 | 25.39 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 8 |
| 836 | 25.39 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 5 | 10 |
| 919 | 25.40 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 23 |