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Os03g0129100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Seven transmembrane protein MLO2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0236) R2 : 0.776
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.85 (0.0476) R2dE : 0.743 R2E : 0.73
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.422 (0.0496) R2dN8 : 0.0458 R2N8 : 0.0327
σ : 0.443
deviance : 90.51
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 16.79
memory length : 10
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.08 0.388 10.4 -0.476 0.983 1.17 0.275 -1.08 0.351 23.2 20.65 10 -- --
69.9 0.389 10.4 -0.448 0.942 1.25 -0.698 -- 0.38 22.9 23.69 15 -- --
68.15 0.384 10.4 -0.473 0.979 1.17 -- -0.856 0.354 23.2 20.84 10 -- --
71.98 0.395 10.4 -0.449 1.01 1.14 -- -- 0.349 23.2 20.71 9 -- --
80.44 0.418 10.4 -0.471 -- 1.86 -- -0.947 0.373 -- 16.41 10 -- --
93.27 0.453 10.4 -0.512 2.15 -- -0.626 -- 0.331 23.6 -- -- -- --
94.97 0.456 10.4 -0.486 2.15 -- -- -- 0.334 23.6 -- -- -- --
85.39 0.43 10.4 -0.444 -- 1.85 -- -- 0.367 -- 16.44 9 -- --
77.21 0.409 10.4 -- 1.02 1.15 -- -- 0.403 23.1 22.39 10 -- --
386.21 0.918 10.4 -0.427 -- -- -- -- 0.358 -- -- -- -- --
101.2 0.471 10.4 -- 2.15 -- -- -- 0.388 23.6 -- -- -- --
90.51 0.443 10.4 -- -- 1.85 -- -- 0.422 -- 16.79 10 -- --
391.01 0.923 10.4 -- -- -- -- -- 0.406 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 65.82 radiation 10 10 < th dose dependent sin 23 NA
6 67.02 radiation 30 270 < th dose dependent rect. 24 18
8 67.16 radiation 30 90 < th dose dependent rect. 2 17
17 67.93 radiation 20 270 < th dose independent rect. 24 18
18 67.95 radiation 20 10 < th dose dependent rect. 11 23
20 68.10 radiation 20 10 < th dose dependent no NA NA
22 68.12 radiation 20 10 < th dose dependent rect. 15 23
23 68.14 radiation 20 10 < th dose dependent rect. 13 23
35 68.45 radiation 20 90 < th dose independent rect. 2 17
39 68.53 radiation 20 10 < th dose dependent rect. 9 23
55 69.08 radiation 30 10 < th dose dependent rect. 2 19
79 69.46 radiation 30 90 < th dose dependent rect. 11 23
86 69.56 humidity 60 10 > th dose dependent rect. 2 18
89 69.64 radiation 30 90 < th dose dependent rect. 24 23
94 69.71 radiation 20 10 < th dose dependent rect. 2 21
107 69.85 radiation 20 10 < th dose dependent rect. 24 23
162 70.40 radiation 40 270 < th dose independent rect. 11 8
170 70.43 radiation 10 10 < th dose independent rect. 2 19
179 70.46 radiation 20 90 < th dose independent rect. 24 23
204 70.71 radiation 10 10 < th dose independent sin 23 NA
205 70.71 radiation 10 10 < th dose independent rect. 2 21
215 70.79 radiation 10 10 < th dose independent rect. 24 23
246 71.01 radiation 10 90 > th dose independent sin 0 NA
281 71.26 radiation 20 10 < th dose dependent rect. 9 11
336 71.56 radiation 10 90 > th dose independent rect. 17 23
360 71.71 radiation 40 270 < th dose dependent rect. 11 8
367 71.75 radiation 20 90 < th dose dependent rect. 8 11
376 71.79 radiation 10 90 > th dose independent rect. 7 9
439 72.04 radiation 10 10 > th dose independent sin 23 NA
489 72.28 radiation 30 90 < th dose dependent rect. 15 20
548 72.55 radiation 10 10 < th dose independent rect. 8 13
564 72.62 radiation 40 270 < th dose dependent rect. 24 10
565 72.63 humidity 50 270 > th dose independent rect. 13 6
614 72.83 radiation 20 90 < th dose independent rect. 11 23
625 72.87 radiation 40 270 < th dose dependent rect. 13 5
652 72.94 humidity 70 10 > th dose independent rect. 2 18
699 73.17 radiation 20 270 < th dose independent rect. 24 9
720 73.24 radiation 10 90 < th dose independent rect. 9 10
759 73.36 humidity 70 90 > th dose independent rect. 2 17
806 73.51 humidity 50 270 > th dose independent rect. 1 18
811 73.52 radiation 10 10 > th dose independent rect. 8 8
814 73.53 radiation 20 90 < th dose independent rect. 13 22
817 73.54 radiation 40 270 < th dose independent rect. 13 16
829 73.58 radiation 10 90 > th dose independent rect. 8 23
838 73.60 radiation 10 10 < th dose independent rect. 13 23
846 73.61 radiation 10 10 < th dose independent rect. 9 23
852 73.63 wind 7 270 < th dose independent rect. 19 6
866 73.67 radiation 10 10 > th dose independent rect. 8 23
867 73.67 radiation 10 10 < th dose independent rect. 15 23
873 73.68 radiation 10 10 < th dose independent no NA NA
881 73.71 atmosphere 995 270 > th dose independent rect. 1 18
901 73.73 radiation 10 10 < th dose independent rect. 11 23
922 73.80 radiation 10 10 < th dose independent rect. 7 23