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Os03g0128700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Calcium-dependent protein kinase, isoform 11 (EC 2.7.1.-) (CDPK 11).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.027) R2 : 0.576
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.77 (0.072) R2dE : 0.535 R2E : 0.55
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.228 (0.057) R2dN8 : 0.0266 R2N8 : 0.041
σ : 0.506
deviance : 118.1
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C
peak time of C : --
E
wheather : temperature
threshold : -53.85
memory length : 453
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.2
open length of G : 19.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.28 0.444 11 -1.06 2.47 1.96 -2.85 -3.46 0.0825 0.948 8.311 257 1.07 17.9
96.21 0.457 11 -0.678 2.53 1.98 -1.31 -- 0.143 0.882 5.628 244 0.85 18.2
98.8 0.463 10.9 -0.47 2.53 1.84 -- 0.685 0.252 0.768 2.361 229 1.18 17.9
99.06 0.464 10.9 -0.502 2.59 1.89 -- -- 0.237 0.734 0.3797 234 1.3 17.8
167.25 0.602 11 -1.61 -- 1.94 -- -4.49 -0.069 -- -20.19 872 5.45 22.8
144.28 0.563 10.9 -0.356 1.33 -- -1.25 -- 0.366 0.691 -- -- -- --
150.94 0.575 10.9 -0.309 1.33 -- -- -- 0.373 0.691 -- -- -- --
113.2 0.496 10.9 -0.495 -- 1.83 -- -- 0.191 -- -28.71 450 11.4 19.4
106.39 0.48 10.9 -- 2.63 1.85 -- -- 0.279 0.674 -3.254 241 1.36 17.6
262.31 0.757 10.9 -0.261 -- -- -- -- 0.396 -- -- -- -- --
153.46 0.579 10.9 -- 1.33 -- -- -- 0.407 0.68 -- -- -- --
118.1 0.506 10.9 -- -- 1.77 -- -- 0.228 -- -53.85 453 11.2 19.9
264.11 0.759 10.8 -- -- -- -- -- 0.425 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 89.96 temperature 10.0 270 > th dose dependent rect. 1 18
6 92.86 temperature 10.0 270 > th dose dependent rect. 24 9
13 95.26 radiation 40.0 10 < th dose dependent rect. 3 17
17 95.75 radiation 20.0 10 < th dose independent rect. 3 17
27 96.82 temperature 15.0 90 > th dose independent rect. 3 17
33 97.48 atmosphere 1010.0 270 < th dose independent rect. 1 18
37 97.83 temperature 15.0 270 > th dose independent rect. 1 17
46 98.92 atmosphere 1010.0 90 < th dose independent rect. 3 17
75 100.23 atmosphere 1010.0 270 < th dose independent rect. 24 9
83 100.67 radiation 20.0 270 < th dose independent rect. 24 8
91 100.87 humidity 70.0 270 > th dose independent rect. 24 8
101 101.07 precipitation 0.1 90 < th dose independent rect. 20 7
102 101.07 precipitation 0.1 90 < th dose dependent rect. 20 7
103 101.09 atmosphere 1010.0 270 < th dose independent rect. 11 9
107 101.19 temperature 30.0 270 < th dose independent rect. 18 7
112 101.31 wind 9.0 90 < th dose independent rect. 20 7
114 101.32 radiation 1.0 90 < th dose dependent rect. 20 7
115 101.33 temperature 10.0 90 > th dose independent rect. 20 7
116 101.33 temperature 30.0 90 < th dose independent rect. 20 7
117 101.33 humidity 50.0 90 > th dose independent rect. 20 7
120 101.33 atmosphere 995.0 90 > th dose independent rect. 20 7
121 101.33 radiation 1.0 90 < th dose independent rect. 20 7
134 101.36 radiation 1.0 270 < th dose dependent rect. 18 7
137 101.38 wind 5.0 30 < th dose independent rect. 20 7
139 101.41 humidity 60.0 270 > th dose independent rect. 18 7
150 101.61 atmosphere 995.0 90 > th dose independent rect. 3 17
152 101.65 wind 1.0 270 > th dose independent rect. 12 7
158 101.76 radiation 1.0 270 < th dose independent rect. 18 7
159 101.76 wind 9.0 90 < th dose independent rect. 3 17
163 101.87 precipitation 0.1 10 < th dose independent rect. 20 7
164 101.87 temperature 15.0 270 > th dose independent rect. 23 21
165 101.87 precipitation 0.1 10 < th dose dependent rect. 20 7
180 102.11 wind 9.0 10 < th dose independent rect. 3 17
182 102.14 precipitation 0.1 270 < th dose independent rect. 1 18
183 102.14 precipitation 0.1 270 < th dose dependent rect. 1 18
184 102.16 temperature 10.0 10 > th dose independent rect. 20 7
185 102.16 temperature 30.0 10 < th dose independent rect. 20 7
186 102.16 humidity 50.0 10 > th dose independent rect. 20 7
189 102.16 atmosphere 995.0 10 > th dose independent rect. 20 7
190 102.16 radiation 1.0 10 < th dose independent rect. 20 7
195 102.16 temperature 10.0 10 > th dose independent rect. 3 17
197 102.16 atmosphere 995.0 10 > th dose independent rect. 3 17
198 102.16 atmosphere 1015.0 10 < th dose independent rect. 3 17
200 102.16 radiation 1.0 10 < th dose dependent rect. 20 7
209 102.18 wind 9.0 10 < th dose independent rect. 20 7
210 102.19 wind 9.0 270 < th dose independent rect. 18 7
211 102.19 humidity 50.0 90 > th dose dependent rect. 20 7
219 102.24 temperature 10.0 270 > th dose independent rect. 18 7
236 102.25 precipitation 0.1 90 < th dose independent rect. 3 17
244 102.25 precipitation 0.1 90 < th dose dependent rect. 3 17
245 102.27 humidity 50.0 10 > th dose dependent rect. 20 7
247 102.28 precipitation 0.1 270 < th dose independent rect. 18 7
248 102.28 atmosphere 995.0 270 > th dose independent rect. 1 17
249 102.28 precipitation 0.1 270 < th dose dependent rect. 18 7
252 102.31 humidity 50.0 270 > th dose dependent rect. 18 7
283 102.55 atmosphere 995.0 270 > th dose independent rect. 13 6
284 102.56 temperature 10.0 270 > th dose independent rect. 13 6
286 102.56 atmosphere 1010.0 270 < th dose independent rect. 13 6
288 102.56 temperature 10.0 270 > th dose independent rect. 19 18
289 102.56 atmosphere 995.0 270 > th dose independent rect. 19 18
294 102.62 radiation 40.0 270 < th dose dependent rect. 24 9
296 102.63 precipitation 0.1 10 < th dose independent rect. 3 17
297 102.63 precipitation 0.1 10 < th dose dependent rect. 3 17
317 102.88 radiation 1.0 270 < th dose dependent rect. 6 19
319 102.95 precipitation 0.1 270 < th dose independent rect. 13 6
320 102.95 precipitation 0.1 270 < th dose dependent rect. 13 6
330 103.16 wind 9.0 270 < th dose independent rect. 1 17
336 103.22 wind 9.0 30 < th dose dependent rect. 20 7
340 103.29 radiation 10.0 10 < th dose dependent sin 0 NA
342 103.31 precipitation 0.1 270 < th dose independent rect. 19 18
343 103.31 precipitation 0.1 270 < th dose dependent rect. 19 18
346 103.33 wind 9.0 270 < th dose independent rect. 19 18
349 103.36 precipitation 0.1 270 < th dose independent rect. 24 8
350 103.36 precipitation 0.1 270 < th dose dependent rect. 24 8
357 103.47 wind 1.0 270 > th dose independent rect. 19 6
378 103.68 temperature 15.0 270 > th dose independent rect. 24 8
380 103.70 wind 9.0 270 < th dose independent rect. 24 8
382 103.70 temperature 30.0 270 < th dose independent rect. 24 8
383 103.70 humidity 50.0 270 > th dose independent rect. 24 8
385 103.70 atmosphere 995.0 270 > th dose independent rect. 24 8
386 103.70 temperature 10.0 270 > th dose independent rect. 8 16
395 103.79 wind 9.0 270 < th dose independent rect. 8 16
412 104.01 radiation 40.0 90 < th dose independent rect. 13 7
413 104.03 wind 9.0 270 < th dose independent rect. 13 6
416 104.04 precipitation 0.1 270 < th dose independent rect. 8 16
418 104.04 precipitation 0.1 270 < th dose dependent rect. 8 16
419 104.08 humidity 50.0 270 > th dose independent rect. 19 17
458 104.30 humidity 50.0 10 > th dose independent rect. 3 17
493 104.58 radiation 40.0 10 < th dose dependent rect. 12 8
529 104.79 temperature 30.0 270 < th dose independent rect. 19 17
560 105.15 temperature 10.0 90 > th dose dependent rect. 20 7
566 105.17 temperature 15.0 720 > th dose dependent rect. 21 14
577 105.27 radiation 1.0 270 < th dose independent rect. 6 19
580 105.28 temperature 10.0 10 > th dose dependent rect. 20 7
583 105.30 temperature 10.0 270 > th dose independent rect. 6 8
584 105.30 atmosphere 995.0 270 > th dose independent rect. 6 8
585 105.30 atmosphere 1015.0 270 < th dose independent rect. 6 8
586 105.30 temperature 10.0 270 > th dose independent rect. 14 16
617 105.44 temperature 15.0 720 > th dose dependent sin 9 NA
618 105.44 humidity 50.0 270 > th dose dependent rect. 24 7
711 105.71 precipitation 0.1 270 < th dose independent rect. 6 8
712 105.71 precipitation 0.1 270 < th dose dependent rect. 6 8
730 105.80 atmosphere 995.0 90 > th dose dependent rect. 20 7
759 105.97 temperature 30.0 270 < th dose dependent rect. 7 4
767 106.03 radiation 40.0 270 < th dose independent rect. 14 16
776 106.09 wind 9.0 270 < th dose independent rect. 6 8
779 106.09 temperature 30.0 270 < th dose dependent rect. 7 6
815 106.19 atmosphere 995.0 270 > th dose independent rect. 14 16
821 106.20 wind 9.0 270 < th dose dependent rect. 18 7
826 106.24 wind 9.0 270 < th dose dependent rect. 19 5
843 106.36 temperature 10.0 1440 > th dose independent rect. 21 7
846 106.36 temperature 30.0 1440 < th dose independent rect. 21 7
850 106.36 humidity 50.0 1440 > th dose independent rect. 21 7
856 106.36 atmosphere 995.0 1440 > th dose independent rect. 21 7
857 106.36 radiation 1.0 1440 < th dose independent rect. 21 7
877 106.36 temperature 10.0 1440 > th dose independent rect. 4 17
882 106.37 radiation 20.0 1440 < th dose dependent rect. 21 7
886 106.38 precipitation 0.1 270 < th dose independent rect. 14 16
887 106.38 precipitation 0.1 270 < th dose dependent rect. 14 16
919 106.56 humidity 50.0 270 > th dose dependent rect. 20 3
965 106.79 temperature 25.0 720 < th dose dependent rect. 21 13
972 106.83 wind 9.0 270 < th dose independent rect. 14 16