Os03g0128100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Callose synthase 1 catalytic subunit.
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Os03g0128100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Callose synthase 1 catalytic subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.76 | 0.277 | 12.3 | -0.441 | 0.638 | 0.789 | 0.753 | 0.373 | 0.363 | 21.3 | 91.68 | 234 | -- | -- |
| 34.93 | 0.275 | 12.3 | -0.433 | 0.632 | 0.807 | 0.728 | -- | 0.364 | 21.4 | 91.87 | 229 | -- | -- |
| 36.73 | 0.282 | 12.3 | -0.462 | 0.626 | 0.753 | -- | 0.244 | 0.362 | 21.3 | 91.48 | 222 | -- | -- |
| 36.8 | 0.283 | 12.3 | -0.459 | 0.626 | 0.765 | -- | -- | 0.364 | 21.3 | 91.55 | 221 | -- | -- |
| 54.71 | 0.344 | 12.3 | -0.459 | -- | 0.48 | -- | 0.475 | 0.339 | -- | 87.32 | 9 | -- | -- |
| 44.27 | 0.312 | 12.3 | -0.364 | 0.579 | -- | 0.681 | -- | 0.253 | 23.2 | -- | -- | -- | -- |
| 46.25 | 0.318 | 12.3 | -0.392 | 0.576 | -- | -- | -- | 0.251 | 23.2 | -- | -- | -- | -- |
| 55.13 | 0.346 | 12.3 | -0.461 | -- | 0.531 | -- | -- | 0.352 | -- | 88.77 | 4 | -- | -- |
| 42.28 | 0.303 | 12.3 | -- | 0.616 | 0.709 | -- | -- | 0.405 | 21.4 | 91.7 | 216 | -- | -- |
| 66.99 | 0.382 | 12.3 | -0.378 | -- | -- | -- | -- | 0.256 | -- | -- | -- | -- | -- |
| 50.3 | 0.332 | 12.3 | -- | 0.573 | -- | -- | -- | 0.295 | 23.1 | -- | -- | -- | -- |
| 60.64 | 0.363 | 12.3 | -- | -- | 0.482 | -- | -- | 0.395 | -- | 88.48 | 5 | -- | -- |
| 70.76 | 0.393 | 12.3 | -- | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.01 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 2 | 33.03 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 13 | 33.61 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 7 |
| 14 | 33.61 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 17 | 33.70 | humidity | 90.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 28 | 33.76 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 24 | 14 |
| 50 | 33.91 | humidity | 90.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 69 | 34.14 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 75 | 34.20 | humidity | 90.0 | 90 | > th | dose independent | sin | 4 | NA |
| 83 | 34.30 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 109 | 34.49 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 115 | 34.52 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 153 | 34.73 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 158 | 34.76 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 161 | 34.77 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 164 | 34.78 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 214 | 34.95 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 221 | 34.95 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 284 | 35.15 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 313 | 35.27 | humidity | 90.0 | 90 | < th | dose independent | rect. | 24 | 15 |
| 332 | 35.32 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 373 | 35.40 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 393 | 35.43 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 419 | 35.47 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 21 |
| 445 | 35.61 | humidity | 90.0 | 90 | < th | dose independent | sin | 4 | NA |
| 453 | 35.66 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 470 | 35.69 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 497 | 35.75 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 501 | 35.75 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 531 | 35.81 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 16 |
| 555 | 35.86 | humidity | 90.0 | 10 | < th | dose independent | rect. | 20 | 20 |
| 580 | 35.89 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 582 | 35.90 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 589 | 35.91 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 590 | 35.91 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 591 | 35.91 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 593 | 35.91 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 594 | 35.91 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 599 | 35.91 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 601 | 35.91 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 602 | 35.91 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 632 | 35.96 | humidity | 90.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 636 | 35.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 638 | 35.98 | humidity | 90.0 | 10 | < th | dose independent | rect. | 22 | 18 |
| 641 | 35.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 649 | 35.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 650 | 35.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 668 | 36.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 669 | 36.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 670 | 36.03 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 671 | 36.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 684 | 36.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 696 | 36.08 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 717 | 36.14 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 733 | 36.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 779 | 36.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 6 |
| 781 | 36.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 800 | 36.30 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 813 | 36.32 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 837 | 36.34 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 839 | 36.34 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 890 | 36.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 894 | 36.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 895 | 36.43 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 902 | 36.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 903 | 36.43 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 905 | 36.43 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 912 | 36.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 916 | 36.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 919 | 36.45 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 925 | 36.46 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 950 | 36.48 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 953 | 36.48 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 969 | 36.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 17 |
| 973 | 36.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 17 |