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Os03g0124300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0132) R2 : 0.047
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.131 (0.0277) R2dN8 : 0.0606 R2N8 : 0.047
σ : 0.248
deviance : 28.16
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.94 0.22 12.5 0.738 0.0959 -0.183 -0.474 4.13 0.264 15.6 26.68 651 -- --
23.61 0.226 12.6 0.215 0.0472 0.311 -0.317 -- 0.184 15.9 29.7 572 -- --
22.43 0.221 12.5 0.79 0.139 -0.274 -- 4.39 0.271 17.3 27 711 -- --
23.93 0.228 12.6 0.214 0.0456 0.3 -- -- 0.184 16.1 29.9 593 -- --
22.99 0.223 12.5 0.643 -- -0.115 -- 3.8 0.238 -- 27.18 642 -- --
25.23 0.235 12.6 0.266 0.0804 -- 0.541 -- 0.16 20.7 -- -- -- --
25.74 0.238 12.6 0.252 0.124 -- -- -- 0.162 17.7 -- -- -- --
24.03 0.228 12.6 0.212 -- 0.326 -- -- 0.184 -- 29.8 578 -- --
25.13 0.233 12.6 -- 0.0354 0.33 -- -- 0.167 15.1 29.9 604 -- --
26.54 0.241 12.6 0.248 -- -- -- -- 0.159 -- -- -- -- --
27.41 0.245 12.6 -- 0.12 -- -- -- 0.134 17.8 -- -- -- --
25.19 0.234 12.6 -- -- 0.352 -- -- 0.164 -- 29.8 587 -- --
28.16 0.248 12.6 -- -- -- -- -- 0.131 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.75 temperature 30 720 < th dose independent rect. 6 8
3 21.87 temperature 30 720 > th dose independent rect. 8 7
13 21.87 temperature 30 720 < th dose independent rect. 21 16
32 21.92 temperature 30 720 < th dose independent sin 6 NA
37 21.95 temperature 30 720 > th dose independent sin 6 NA
40 21.98 temperature 25 720 > th dose dependent rect. 6 11
45 21.99 temperature 30 720 > th dose independent rect. 11 3
64 22.05 temperature 30 720 < th dose independent rect. 23 16
65 22.05 temperature 25 720 > th dose dependent rect. 12 3
86 22.10 temperature 25 720 > th dose dependent sin 1 NA
106 22.14 temperature 25 720 > th dose dependent rect. 12 1
155 22.24 temperature 30 720 < th dose independent rect. 1 14
226 22.36 temperature 30 720 < th dose independent rect. 19 23
280 22.44 humidity 60 270 > th dose independent rect. 18 23
283 22.45 temperature 30 270 > th dose independent rect. 14 23
284 22.45 humidity 60 270 > th dose independent rect. 20 23
312 22.48 temperature 30 270 > th dose independent rect. 11 23
328 22.51 radiation 30 720 < th dose independent rect. 18 17
343 22.53 temperature 30 720 < th dose independent rect. 3 12
344 22.53 humidity 60 720 > th dose independent rect. 24 15
346 22.53 temperature 30 720 > th dose dependent sin 7 NA
373 22.54 humidity 60 270 > th dose independent rect. 7 23
374 22.54 temperature 25 270 > th dose dependent sin 14 NA
375 22.54 temperature 25 720 > th dose dependent no NA NA
382 22.55 temperature 30 270 > th dose independent sin 18 NA
401 22.56 temperature 30 270 > th dose independent no NA NA
402 22.56 humidity 60 270 > th dose independent sin 17 NA
403 22.56 temperature 30 720 < th dose independent rect. 3 8
404 22.56 temperature 30 720 < th dose independent rect. 3 10
500 22.56 temperature 30 720 < th dose independent rect. 16 23
517 22.56 temperature 25 720 > th dose dependent rect. 11 23
519 22.57 temperature 30 270 < th dose independent sin 20 NA
537 22.59 humidity 60 720 < th dose independent rect. 11 4
573 22.60 temperature 30 720 < th dose independent rect. 21 21
574 22.60 humidity 60 270 < th dose independent rect. 11 22
581 22.60 radiation 30 720 > th dose dependent rect. 15 18
591 22.61 humidity 60 270 < th dose independent rect. 11 8
626 22.61 temperature 30 720 < th dose independent rect. 19 20
642 22.62 humidity 60 270 < th dose independent rect. 11 6
644 22.62 humidity 60 270 > th dose independent rect. 11 15
698 22.64 humidity 70 720 < th dose dependent rect. 11 2
718 22.65 temperature 30 270 < th dose independent no NA NA
727 22.66 humidity 60 270 < th dose independent sin 20 NA
746 22.66 humidity 70 270 < th dose dependent rect. 10 23
754 22.67 humidity 70 270 < th dose dependent rect. 10 21
758 22.68 humidity 60 270 > th dose independent no NA NA
760 22.68 humidity 60 720 < th dose independent rect. 13 1
761 22.68 temperature 30 720 < th dose independent rect. 6 16
766 22.68 humidity 70 270 < th dose dependent sin 20 NA
775 22.68 temperature 25 270 > th dose dependent rect. 15 8
781 22.68 humidity 70 270 < th dose dependent rect. 10 10
816 22.69 radiation 30 720 < th dose independent rect. 24 11
851 22.69 temperature 25 270 > th dose dependent rect. 15 17
863 22.70 temperature 30 270 < th dose independent rect. 6 23
892 22.72 temperature 30 270 < th dose independent sin 11 NA
896 22.72 temperature 30 270 < th dose independent rect. 8 23
921 22.73 temperature 30 270 > th dose independent sin 11 NA