Os03g0122300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Flavanone 3-hydroxylase-like protein.
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Os03g0122300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Flavanone 3-hydroxylase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 230.49 | 0.713 | 9.57 | -1.1 | 0.811 | 0.735 | 1.54 | -14.8 | 0.58 | 1.24 | 32.9 | 889 | -- | -- |
| 240.35 | 0.722 | 9.31 | 0.772 | 0.883 | -0.829 | 1.59 | -- | 0.81 | 1.08 | 29.4 | 1008 | -- | -- |
| 240.27 | 0.722 | 9.57 | -1.1 | 0.811 | 0.735 | -- | -14.1 | 0.58 | 1.24 | 32.9 | 889 | -- | -- |
| 249.04 | 0.735 | 9.37 | 0.589 | 0.807 | -0.854 | -- | -- | 0.677 | 0.744 | 29.51 | 859 | -- | -- |
| 274.97 | 0.772 | 9.48 | -0.494 | -- | 0.614 | -- | -14.1 | 0.63 | -- | 33.7 | 738 | -- | -- |
| 262.91 | 0.76 | 9.34 | 0.471 | 0.736 | -- | 1.28 | -- | 0.704 | 1.93 | -- | -- | -- | -- |
| 268.94 | 0.768 | 9.34 | 0.431 | 0.747 | -- | -- | -- | 0.696 | 2.32 | -- | -- | -- | -- |
| 255.14 | 0.747 | 9.26 | 0.58 | -- | -0.692 | -- | -- | 1.04 | -- | 25.4 | 76 | -- | -- |
| 258.23 | 0.748 | 9.36 | -- | 0.799 | -0.751 | -- | -- | 0.627 | 1.24 | 29.59 | 860 | -- | -- |
| 302.08 | 0.812 | 9.34 | 0.462 | -- | -- | -- | -- | 0.714 | -- | -- | -- | -- | -- |
| 273.83 | 0.774 | 9.35 | -- | 0.756 | -- | -- | -- | 0.648 | 2.33 | -- | -- | -- | -- |
| 263.95 | 0.759 | 9.28 | -- | -- | -0.666 | -- | -- | 0.965 | -- | 25.4 | 76 | -- | -- |
| 307.71 | 0.819 | 9.35 | -- | -- | -- | -- | -- | 0.663 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 228.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 13 |
| 2 | 228.99 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 4 |
| 5 | 230.51 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 8 | 231.44 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 12 |
| 16 | 232.81 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 8 |
| 19 | 233.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 21 | 233.42 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 28 | 234.14 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 31 | 234.14 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 36 | 234.39 | humidity | 60.0 | 720 | > th | dose independent | rect. | 15 | 5 |
| 41 | 234.43 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 42 | 234.47 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 56 | 234.60 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 11 |
| 67 | 234.67 | temperature | 30.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 136 | 235.21 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 284 | 236.45 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 330 | 236.64 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 18 |
| 340 | 236.74 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 368 | 236.95 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 406 | 236.99 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 440 | 237.18 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 442 | 237.18 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 443 | 237.18 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 15 |
| 465 | 237.24 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 484 | 237.29 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 583 | 237.44 | temperature | 30.0 | 1440 | > th | dose dependent | no | NA | NA |
| 789 | 237.85 | temperature | 30.0 | 720 | < th | dose independent | sin | 15 | NA |
| 795 | 237.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 9 |
| 813 | 237.96 | temperature | 30.0 | 720 | > th | dose independent | rect. | 16 | 2 |
| 816 | 237.97 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 11 |
| 824 | 238.02 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 830 | 238.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 7 |
| 865 | 238.23 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 929 | 238.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 11 |
| 957 | 238.55 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 965 | 238.58 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |