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Os03g0120900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to AP2 domain containing protein RAP2.8 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.41 (0.0254) R2 : 0.483
β1 : 0.887 (0.0928) R2dD : 0.107 R2D : 0.115
β2 : 0.977 (0.0606) R2dC : 0.296 R2C : 0.284
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.352 (0.0541) R2dN8 : 0.0641 R2N8 : 0.075
σ : 0.477
deviance : 103.67
__
_____
C
peak time of C : 22.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.18 0.456 8.33 1.34 0.94 -0.152 -0.648 -3.35 -0.224 22.8 0.001079 1386 -- --
99.28 0.464 8.37 1.05 1.2 0.836 -0.461 -- -0.215 22.2 0.0115 2522 -- --
94.28 0.452 8.33 1.35 0.978 -0.162 -- -3.38 -0.221 22.8 3.188e-05 1465 -- --
98.97 0.463 8.38 1.07 1.26 0.865 -- -- -0.191 22.4 0.01016 2546 -- --
116.22 0.505 8.38 0.954 -- 0.648 -- -0.435 -0.307 -- 0.1298 1634 -- --
103.42 0.477 8.41 0.877 0.976 -- -0.245 -- -0.352 22.8 -- -- -- --
103.67 0.477 8.41 0.887 0.977 -- -- -- -0.352 22.8 -- -- -- --
114.26 0.5 8.39 0.933 -- 0.667 -- -- -0.339 -- 0.4872 6086 -- --
124.18 0.519 8.44 -- 1.09 0.556 -- -- -0.446 21.8 0.4212 2103 -- --
162.86 0.596 8.39 0.907 -- -- -- -- -0.345 -- -- -- -- --
124.39 0.522 8.43 -- 0.985 -- -- -- -0.45 22.9 -- -- -- --
133.19 0.539 8.41 -- -- 0.69 -- -- -0.429 -- 2.461 6066 -- --
184.56 0.634 8.41 -- -- -- -- -- -0.446 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.45 temperature 25.0 270 < th dose independent rect. 13 17
2 90.46 temperature 15.0 90 > th dose dependent rect. 20 7
3 90.50 temperature 25.0 270 < th dose independent rect. 15 15
6 90.71 temperature 25.0 270 > th dose independent rect. 19 13
9 90.99 wind 1.0 43200 < th dose independent rect. 7 1
20 91.31 wind 1.0 43200 < th dose independent rect. 5 3
22 91.38 wind 1.0 43200 > th dose independent rect. 7 1
25 91.41 humidity 90.0 43200 > th dose independent rect. 5 1
29 91.57 wind 1.0 43200 > th dose independent rect. 5 3
30 91.58 humidity 90.0 43200 < th dose independent rect. 23 1
32 91.61 temperature 20.0 10 > th dose dependent rect. 22 6
33 91.64 radiation 10.0 43200 < th dose dependent rect. 21 7
38 91.80 atmosphere 995.0 43200 < th dose independent rect. 12 18
43 91.89 temperature 25.0 270 > th dose independent sin 11 NA
49 91.95 atmosphere 995.0 43200 > th dose independent rect. 12 19
57 91.99 atmosphere 995.0 43200 > th dose independent rect. 15 19
60 92.01 atmosphere 995.0 43200 < th dose dependent rect. 14 11
83 92.15 radiation 1.0 270 < th dose dependent rect. 3 15
113 92.39 humidity 90.0 14400 > th dose independent rect. 1 3
120 92.46 radiation 1.0 270 > th dose independent rect. 17 22
125 92.49 humidity 90.0 14400 < th dose independent rect. 1 3
126 92.50 atmosphere 995.0 43200 < th dose independent sin 16 NA
127 92.50 humidity 90.0 43200 < th dose independent rect. 19 6
130 92.51 temperature 25.0 270 > th dose dependent rect. 20 12
136 92.55 atmosphere 995.0 43200 < th dose dependent rect. 13 15
143 92.60 wind 5.0 43200 < th dose independent rect. 17 2
160 92.68 atmosphere 995.0 43200 > th dose independent sin 15 NA
163 92.70 humidity 90.0 43200 < th dose independent rect. 5 1
164 92.70 wind 5.0 43200 > th dose independent rect. 17 2
172 92.72 humidity 90.0 43200 > th dose dependent rect. 5 1
177 92.74 temperature 30.0 30 < th dose dependent rect. 15 18
179 92.75 temperature 25.0 270 > th dose dependent rect. 22 9
183 92.78 humidity 90.0 14400 > th dose dependent rect. 1 3
184 92.78 temperature 30.0 30 < th dose dependent rect. 3 6
187 92.79 wind 1.0 43200 < th dose dependent rect. 5 3
197 92.82 atmosphere 995.0 43200 < th dose dependent sin 15 NA
201 92.83 radiation 1.0 270 < th dose dependent sin 2 NA
210 92.89 radiation 1.0 270 < th dose independent rect. 3 15
216 92.91 humidity 70.0 43200 > th dose independent rect. 8 6
217 92.91 humidity 70.0 43200 < th dose independent rect. 8 7
219 92.91 humidity 90.0 43200 > th dose dependent rect. 1 8
221 92.92 atmosphere 995.0 43200 > th dose independent rect. 4 4
223 92.92 atmosphere 995.0 43200 > th dose independent rect. 24 10
226 92.93 atmosphere 995.0 43200 > th dose independent rect. 2 7
230 92.94 humidity 70.0 43200 < th dose independent rect. 12 1
231 92.94 atmosphere 995.0 43200 < th dose independent rect. 4 4
233 92.94 atmosphere 995.0 43200 < th dose independent rect. 2 7
234 92.94 atmosphere 995.0 43200 < th dose independent rect. 24 10
253 92.97 atmosphere 995.0 43200 < th dose dependent rect. 3 5
268 93.01 atmosphere 995.0 43200 < th dose dependent rect. 24 9
286 93.06 humidity 90.0 43200 > th dose dependent rect. 3 4
318 93.12 temperature 25.0 720 > th dose independent rect. 15 12
334 93.15 temperature 25.0 720 > th dose independent rect. 15 17
368 93.20 humidity 90.0 43200 > th dose dependent sin 7 NA
372 93.21 humidity 80.0 43200 < th dose independent rect. 7 2
388 93.24 atmosphere 995.0 43200 < th dose independent sin 8 NA
389 93.24 humidity 70.0 43200 > th dose independent rect. 9 1
394 93.24 atmosphere 995.0 43200 < th dose dependent sin 10 NA
396 93.25 humidity 80.0 43200 < th dose independent rect. 17 1
416 93.27 atmosphere 995.0 43200 > th dose independent sin 8 NA
432 93.30 radiation 20.0 14400 < th dose independent rect. 11 1
437 93.30 humidity 80.0 43200 < th dose dependent rect. 12 1
453 93.32 radiation 1.0 1440 < th dose dependent rect. 17 13
465 93.34 atmosphere 995.0 43200 > th dose independent rect. 20 15
468 93.34 humidity 90.0 43200 > th dose dependent rect. 19 14
472 93.35 humidity 90.0 43200 > th dose independent rect. 22 3
482 93.35 humidity 90.0 43200 > th dose dependent rect. 19 12
492 93.36 humidity 90.0 43200 < th dose independent rect. 19 17
495 93.37 precipitation 0.1 43200 > th dose independent rect. 24 1
505 93.37 precipitation 0.1 43200 > th dose dependent rect. 24 1
521 93.40 humidity 90.0 43200 > th dose independent rect. 19 6
534 93.41 radiation 1.0 270 < th dose independent sin 2 NA
536 93.41 precipitation 0.1 43200 < th dose independent rect. 24 2
542 93.41 precipitation 0.1 43200 < th dose dependent rect. 24 2
543 93.41 wind 3.0 43200 > th dose dependent rect. 16 3
559 93.43 radiation 1.0 270 > th dose independent sin 2 NA
564 93.43 radiation 10.0 43200 < th dose dependent rect. 13 2
600 93.46 humidity 50.0 30 > th dose dependent rect. 3 17
658 93.52 humidity 60.0 30 > th dose dependent rect. 3 11
695 93.58 precipitation 0.1 43200 > th dose independent rect. 11 1
699 93.58 humidity 90.0 43200 > th dose independent rect. 22 14
703 93.58 precipitation 0.1 43200 > th dose dependent rect. 11 1
704 93.58 radiation 10.0 43200 < th dose dependent rect. 10 5
708 93.59 humidity 90.0 43200 > th dose independent rect. 20 16
711 93.59 radiation 20.0 14400 < th dose dependent rect. 11 2
716 93.60 precipitation 0.1 43200 < th dose independent rect. 11 1
728 93.60 precipitation 0.1 43200 < th dose dependent rect. 11 1
750 93.63 precipitation 0.1 43200 > th dose independent rect. 14 1
754 93.63 precipitation 0.1 43200 > th dose dependent rect. 14 1
756 93.63 temperature 10.0 30 > th dose dependent rect. 9 18
780 93.66 humidity 90.0 43200 < th dose independent rect. 22 14
790 93.67 precipitation 0.1 43200 < th dose independent rect. 14 1
797 93.67 precipitation 0.1 43200 < th dose dependent rect. 14 1
837 93.70 atmosphere 995.0 43200 < th dose dependent rect. 15 9
840 93.70 temperature 30.0 30 < th dose dependent rect. 12 21
857 93.72 wind 9.0 43200 > th dose independent rect. 18 2
893 93.74 wind 7.0 43200 > th dose dependent rect. 18 2
898 93.75 radiation 10.0 43200 > th dose independent rect. 7 5
950 93.79 humidity 70.0 43200 > th dose independent sin 2 NA
954 93.79 precipitation 0.1 43200 > th dose independent rect. 11 4