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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0119600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.76 (0.0296) R2 : 0.0128
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.152 (0.0622) R2dN8 : 0.0166 R2N8 : 0.0128
σ : 0.557
deviance : 142.24
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.89 0.512 3.67 0.61 0.38 -1.27 -0.244 2.04 0.113 14 7.72 310 -- --
121.58 0.514 3.72 0.274 0.357 -1.19 -0.0693 -- 0.019 14 9.069 334 -- --
119.09 0.508 3.68 0.577 0.379 -1.27 -- 1.86 0.105 14 11.48 313 -- --
121.49 0.513 3.71 0.287 0.384 -1.23 -- -- 0.0273 14.1 13.88 312 -- --
121.8 0.514 3.68 0.6 -- -1.1 -- 1.73 0.0958 -- 7.432 704 -- --
137.46 0.55 3.75 0.0248 0.281 -- -0.0448 -- -0.149 9.98 -- -- -- --
137.47 0.549 3.75 0.023 0.281 -- -- -- -0.149 9.98 -- -- -- --
124.13 0.519 3.72 0.293 -- -1.07 -- -- 0.0146 -- 12.31 743 -- --
123.44 0.517 3.72 -- 0.353 -1.09 -- -- -0.0219 13.8 13.27 310 -- --
142.23 0.557 3.75 0.0197 -- -- -- -- -0.149 -- -- -- -- --
137.48 0.548 3.75 -- 0.281 -- -- -- -0.152 9.97 -- -- -- --
126.13 0.523 3.73 -- -- -0.966 -- -- -0.0321 -- 12.05 707 -- --
142.24 0.557 3.76 -- -- -- -- -- -0.152 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 114.23 temperature 10 720 > th dose dependent sin 7 NA
3 114.31 temperature 10 720 > th dose dependent rect. 22 16
4 114.39 temperature 30 720 < th dose dependent rect. 20 16
12 114.65 temperature 30 720 < th dose dependent sin 7 NA
16 114.75 temperature 15 720 > th dose dependent rect. 21 14
25 115.00 temperature 10 720 > th dose dependent rect. 2 8
42 115.20 temperature 10 720 > th dose dependent rect. 19 16
51 115.34 temperature 30 720 < th dose dependent rect. 1 8
147 116.33 temperature 15 90 > th dose dependent rect. 3 18
151 116.36 temperature 15 270 > th dose dependent rect. 24 22
285 117.35 temperature 15 720 > th dose dependent rect. 3 2
287 117.36 wind 5 43200 > th dose independent rect. 19 1
298 117.40 temperature 15 720 > th dose dependent rect. 3 4
319 117.51 wind 9 43200 > th dose dependent rect. 17 8
324 117.54 temperature 10 270 > th dose dependent sin 2 NA
331 117.55 wind 9 43200 > th dose dependent rect. 18 13
360 117.69 wind 9 43200 > th dose independent rect. 18 6
364 117.70 wind 9 43200 > th dose dependent sin 14 NA
365 117.70 temperature 15 30 > th dose dependent rect. 3 23
368 117.71 wind 9 43200 > th dose dependent rect. 13 19
371 117.72 wind 9 43200 > th dose independent rect. 17 8
411 117.92 wind 9 43200 < th dose independent rect. 18 6
423 117.97 humidity 90 14400 > th dose dependent rect. 20 9
435 118.02 wind 5 43200 > th dose dependent rect. 18 3
445 118.06 wind 9 43200 > th dose independent rect. 13 21
448 118.08 wind 5 43200 < th dose independent rect. 19 1
452 118.10 wind 9 43200 < th dose independent rect. 13 21
453 118.10 humidity 90 14400 > th dose dependent rect. 21 6
486 118.23 wind 9 43200 > th dose independent rect. 18 13
491 118.25 wind 9 43200 > th dose dependent rect. 18 4
493 118.26 wind 9 43200 > th dose independent sin 13 NA
535 118.39 wind 9 43200 > th dose dependent sin 17 NA
539 118.41 wind 5 43200 > th dose independent rect. 18 3
584 118.60 temperature 30 270 < th dose dependent sin 2 NA
591 118.63 wind 9 43200 < th dose independent rect. 18 14
601 118.66 wind 5 43200 < th dose independent rect. 18 3
625 118.73 humidity 90 43200 > th dose independent rect. 5 2
634 118.74 temperature 15 30 > th dose dependent rect. 23 23
635 118.75 humidity 90 43200 > th dose independent rect. 4 4
653 118.79 wind 9 43200 < th dose independent sin 13 NA
660 118.80 wind 9 43200 < th dose independent rect. 18 4
725 118.96 humidity 90 14400 > th dose dependent sin 11 NA
753 119.01 temperature 10 270 > th dose dependent no NA NA
767 119.04 temperature 25 720 < th dose dependent rect. 5 1
775 119.05 temperature 30 270 < th dose dependent rect. 4 23
790 119.12 temperature 10 270 > th dose dependent rect. 10 23
794 119.13 wind 5 43200 > th dose dependent rect. 16 9
798 119.14 wind 7 43200 > th dose dependent rect. 6 19
823 119.18 wind 7 43200 > th dose dependent rect. 6 15
846 119.22 temperature 30 270 < th dose dependent rect. 7 23
853 119.23 wind 7 43200 > th dose dependent rect. 22 23
890 119.28 temperature 30 270 < th dose dependent rect. 20 23
903 119.30 wind 7 43200 < th dose independent rect. 15 12
932 119.35 wind 9 43200 > th dose independent rect. 17 22
938 119.35 wind 7 43200 > th dose dependent rect. 2 23
944 119.36 wind 7 43200 > th dose dependent rect. 2 19
948 119.37 wind 7 43200 > th dose independent rect. 15 12
960 119.39 wind 7 43200 > th dose dependent no NA NA
965 119.39 temperature 25 270 < th dose dependent rect. 4 17
990 119.41 wind 7 43200 > th dose dependent rect. 16 23
999 119.43 radiation 30 4320 < th dose independent rect. 18 14