Os03g0119500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Callose synthase 1 catalytic subunit.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0119500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Callose synthase 1 catalytic subunit.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.23 | 0.222 | 12.9 | -0.305 | 0.692 | -0.556 | 0.291 | -0.0706 | 0.345 | 1.52 | 20.86 | 35 | -- | -- |
| 22.19 | 0.221 | 12.9 | -0.304 | 0.698 | -0.501 | 0.288 | -- | 0.342 | 1.5 | 21.37 | 36 | -- | -- |
| 22.49 | 0.223 | 12.9 | -0.324 | 0.691 | -0.504 | -- | 0.152 | 0.341 | 1.47 | 20.86 | 35 | -- | -- |
| 22.51 | 0.222 | 12.9 | -0.317 | 0.693 | -0.543 | -- | -- | 0.342 | 1.47 | 20.86 | 35 | -- | -- |
| 45.85 | 0.315 | 12.9 | -0.36 | -- | -0.834 | -- | -0.262 | 0.331 | -- | 20.09 | 897 | -- | -- |
| 24.45 | 0.232 | 12.9 | -0.217 | 0.646 | -- | 0.312 | -- | 0.387 | 1.54 | -- | -- | -- | -- |
| 24.84 | 0.233 | 12.9 | -0.227 | 0.646 | -- | -- | -- | 0.385 | 1.5 | -- | -- | -- | -- |
| 44.36 | 0.312 | 12.8 | -0.0809 | -- | 0.551 | -- | -- | 0.498 | -- | 30.33 | 1002 | -- | -- |
| 24.92 | 0.234 | 12.9 | -- | 0.679 | -0.36 | -- | -- | 0.385 | 1.46 | 21.4 | 22 | -- | -- |
| 50.42 | 0.332 | 12.8 | -0.201 | -- | -- | -- | -- | 0.399 | -- | -- | -- | -- | -- |
| 26.2 | 0.239 | 12.8 | -- | 0.642 | -- | -- | -- | 0.41 | 1.49 | -- | -- | -- | -- |
| 44.52 | 0.312 | 12.8 | -- | -- | 0.573 | -- | -- | 0.51 | -- | 30.33 | 1002 | -- | -- |
| 51.49 | 0.335 | 12.8 | -- | -- | -- | -- | -- | 0.421 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.70 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 7 | 20.36 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 9 | 20.44 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 12 | 20.48 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 9 |
| 17 | 20.57 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 18 | 20.58 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 20 | 20.62 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 21 | 20.63 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 23 | 20.66 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 25 | 20.66 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 26 | 20.67 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 34 | 20.68 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 36 | 20.69 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 37 | 20.70 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 38 | 20.71 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 39 | 20.72 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 46 | 20.76 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 49 | 20.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 51 | 20.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 56 | 20.79 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 57 | 20.79 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 58 | 20.79 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 65 | 20.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 17 |
| 68 | 20.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 70 | 20.81 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 8 |
| 74 | 20.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 7 |
| 76 | 20.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 78 | 20.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 82 | 20.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 86 | 20.84 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 89 | 20.85 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 90 | 20.86 | humidity | 90.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 94 | 20.86 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 101 | 20.88 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 106 | 20.88 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 113 | 20.90 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 117 | 20.90 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 7 |
| 119 | 20.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 120 | 20.91 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 122 | 20.91 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 123 | 20.91 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 138 | 20.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 140 | 20.91 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 144 | 20.91 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 150 | 20.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 152 | 20.92 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 7 |
| 153 | 20.93 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 154 | 20.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 155 | 20.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 157 | 20.93 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 158 | 20.93 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 161 | 20.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 163 | 20.93 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 164 | 20.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 165 | 20.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 181 | 20.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 189 | 20.95 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 200 | 20.96 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 214 | 20.97 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 218 | 20.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 219 | 20.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 223 | 20.98 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 227 | 20.99 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 228 | 21.00 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |
| 230 | 21.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 234 | 21.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 235 | 21.01 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 257 | 21.03 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 267 | 21.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 269 | 21.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 16 |
| 273 | 21.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 16 |
| 289 | 21.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 17 |
| 301 | 21.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 302 | 21.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 308 | 21.07 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 310 | 21.07 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 318 | 21.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 319 | 21.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 323 | 21.08 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 324 | 21.08 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 327 | 21.08 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 331 | 21.09 | temperature | 15.0 | 10 | > th | dose independent | rect. | 18 | 14 |
| 349 | 21.10 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 15 |
| 356 | 21.10 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 5 |
| 358 | 21.10 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 372 | 21.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 16 |
| 388 | 21.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 396 | 21.14 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 399 | 21.14 | humidity | 50.0 | 30 | > th | dose independent | rect. | 16 | 16 |
| 400 | 21.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 403 | 21.14 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 404 | 21.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 411 | 21.15 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 8 |
| 412 | 21.15 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 422 | 21.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 428 | 21.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 446 | 21.16 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 510 | 21.19 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 8 |
| 523 | 21.19 | temperature | 15.0 | 30 | > th | dose independent | rect. | 12 | 20 |
| 542 | 21.21 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 8 |
| 555 | 21.22 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 603 | 21.24 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 633 | 21.26 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 6 |
| 656 | 21.28 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 675 | 21.28 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 679 | 21.29 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 680 | 21.29 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 695 | 21.29 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 705 | 21.30 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 16 |
| 714 | 21.30 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 715 | 21.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 716 | 21.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 718 | 21.31 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 719 | 21.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 722 | 21.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 723 | 21.31 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 725 | 21.31 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 752 | 21.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 8 |
| 759 | 21.31 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 762 | 21.31 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 779 | 21.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 8 |
| 788 | 21.32 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 8 |
| 791 | 21.32 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 8 |
| 793 | 21.32 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 8 |
| 797 | 21.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 807 | 21.32 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 844 | 21.33 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 16 |
| 850 | 21.33 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 19 |
| 852 | 21.33 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 853 | 21.33 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 22 | 6 |
| 895 | 21.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 921 | 21.35 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 940 | 21.35 | temperature | 20.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 995 | 21.37 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 7 |