Os03g0118400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cell division control protein 2 homolog 1 (EC 2.7.1.37).
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Os03g0118400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cell division control protein 2 homolog 1 (EC 2.7.1.37).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.67 | 0.192 | 11.7 | -0.998 | 0.568 | 1.31 | -0.304 | 1.74 | -0.175 | 1.51 | 20.1 | 295 | -- | -- |
| 17.02 | 0.192 | 11.7 | -0.98 | 0.572 | 0.584 | -0.322 | -- | -0.164 | 1.56 | 21.44 | 290 | -- | -- |
| 17 | 0.192 | 11.7 | -0.982 | 0.566 | 1.17 | -- | 1.39 | -0.168 | 1.43 | 20.34 | 314 | -- | -- |
| 17.27 | 0.194 | 11.7 | -0.969 | 0.579 | 0.567 | -- | -- | -0.152 | 1.46 | 21.92 | 360 | -- | -- |
| 34.97 | 0.275 | 11.7 | -0.936 | -- | 0.869 | -- | 0.4 | -0.12 | -- | 22.42 | 189 | -- | -- |
| 19.78 | 0.209 | 11.7 | -1.1 | 0.599 | -- | -0.309 | -- | -0.218 | 1.68 | -- | -- | -- | -- |
| 20.16 | 0.21 | 11.7 | -1.09 | 0.599 | -- | -- | -- | -0.216 | 1.66 | -- | -- | -- | -- |
| 29.02 | 0.252 | 11.7 | -0.89 | -- | 0.795 | -- | -- | -0.053 | -- | 29.8 | 25 | -- | -- |
| 26.52 | 0.24 | 11.6 | -- | 0.606 | 0.846 | -- | -- | 0.0811 | 1.64 | 20.23 | 47520 | -- | -- |
| 42.05 | 0.303 | 11.7 | -1.07 | -- | -- | -- | -- | -0.202 | -- | -- | -- | -- | -- |
| 51.54 | 0.336 | 11.7 | -- | 0.58 | -- | -- | -- | -0.0942 | 1.6 | -- | -- | -- | -- |
| 48.68 | 0.326 | 11.6 | -- | -- | 1.03 | -- | -- | 0.0847 | -- | 29.8 | 25 | -- | -- |
| 72.08 | 0.396 | 11.7 | -- | -- | -- | -- | -- | -0.084 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 17 | 15.92 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 29 | 16.14 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 7 |
| 33 | 16.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 21 |
| 34 | 16.20 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 11 |
| 38 | 16.21 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 41 | 16.24 | temperature | 25.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 49 | 16.30 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 52 | 16.31 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 9 |
| 74 | 16.37 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 112 | 16.51 | temperature | 20.0 | 720 | < th | dose independent | rect. | 20 | 6 |
| 122 | 16.53 | temperature | 15.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 136 | 16.56 | temperature | 20.0 | 270 | < th | dose independent | sin | 7 | NA |
| 146 | 16.58 | temperature | 20.0 | 270 | > th | dose independent | sin | 8 | NA |
| 149 | 16.58 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 15 |
| 172 | 16.62 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 18 |
| 194 | 16.66 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 21 | 21 |
| 202 | 16.67 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 16 | 19 |
| 204 | 16.68 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 208 | 16.68 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 11 |
| 209 | 16.68 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 220 | 16.69 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 228 | 16.69 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 251 | 16.71 | temperature | 20.0 | 270 | < th | dose independent | rect. | 18 | 16 |
| 261 | 16.71 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 18 |
| 272 | 16.71 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 276 | 16.72 | temperature | 20.0 | 720 | > th | dose independent | sin | 15 | NA |
| 305 | 16.73 | temperature | 20.0 | 270 | < th | dose dependent | no | NA | NA |
| 409 | 16.79 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 436 | 16.81 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 446 | 16.82 | temperature | 20.0 | 720 | < th | dose independent | sin | 15 | NA |
| 470 | 16.83 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 23 |
| 485 | 16.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 504 | 16.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 507 | 16.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 545 | 16.87 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 5 |
| 567 | 16.89 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 18 |
| 667 | 16.95 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 765 | 17.01 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 16 |
| 770 | 17.01 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 818 | 17.04 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 819 | 17.04 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 829 | 17.04 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 843 | 17.05 | wind | 9.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 865 | 17.07 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 889 | 17.08 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 895 | 17.08 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 912 | 17.09 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 998 | 17.13 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 12 |