Os03g0114600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1723 domain containing protein.
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Os03g0114600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1723 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.23 | 0.617 | 3.97 | -0.406 | 0.705 | -0.781 | -0.211 | -0.964 | 0.443 | 11.2 | 1013 | 9264 | -- | -- |
| 174.84 | 0.616 | 4.01 | -0.631 | 0.7 | -0.633 | -0.217 | -- | 0.377 | 11.2 | 1012 | 10236 | -- | -- |
| 172.42 | 0.612 | 3.98 | -0.418 | 0.707 | -0.779 | -- | -0.952 | 0.44 | 11.2 | 1013 | 9275 | -- | -- |
| 175.02 | 0.616 | 4.01 | -0.662 | 0.697 | -0.66 | -- | -- | 0.371 | 11.2 | 1012 | 10178 | -- | -- |
| 203.16 | 0.664 | 4 | -0.426 | -- | -0.707 | -- | -0.799 | 0.432 | -- | 1013 | 10523 | -- | -- |
| 193.2 | 0.652 | 3.97 | -0.343 | 0.691 | -- | -0.263 | -- | 0.56 | 11.2 | -- | -- | -- | -- |
| 193.5 | 0.651 | 3.97 | -0.354 | 0.693 | -- | -- | -- | 0.558 | 11.1 | -- | -- | -- | -- |
| 205.33 | 0.667 | 4.03 | -0.684 | -- | -0.66 | -- | -- | 0.372 | -- | 1012 | 10389 | -- | -- |
| 185.04 | 0.634 | 3.98 | -- | 0.711 | -0.49 | -- | -- | 0.481 | 11.2 | 1011 | 10657 | -- | -- |
| 223.47 | 0.699 | 3.99 | -0.37 | -- | -- | -- | -- | 0.553 | -- | -- | -- | -- | -- |
| 196.8 | 0.656 | 3.96 | -- | 0.696 | -- | -- | -- | 0.598 | 11.2 | -- | -- | -- | -- |
| 215.81 | 0.684 | 4 | -- | -- | -0.476 | -- | -- | 0.478 | -- | 1011 | 10600 | -- | -- |
| 227.09 | 0.703 | 3.98 | -- | -- | -- | -- | -- | 0.594 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.60 | humidity | 70 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 2 | 169.72 | humidity | 70 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 9 | 169.78 | humidity | 70 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 14 | 170.30 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 16 | 170.42 | humidity | 70 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 27 | 170.75 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 8 |
| 29 | 170.82 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 6 |
| 32 | 171.08 | humidity | 80 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 35 | 171.27 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 36 | 171.31 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 44 | 171.56 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 11 |
| 46 | 171.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 50 | 171.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 54 | 171.66 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 57 | 171.71 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 63 | 171.74 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 84 | 172.09 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 91 | 172.18 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 92 | 172.20 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 101 | 172.31 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 17 |
| 106 | 172.42 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 107 | 172.42 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 15 |
| 112 | 172.44 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 123 | 172.59 | wind | 1 | 14400 | < th | dose dependent | sin | 5 | NA |
| 138 | 172.71 | humidity | 70 | 14400 | < th | dose dependent | rect. | 21 | 12 |
| 191 | 172.97 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 197 | 173.01 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 222 | 173.16 | wind | 1 | 14400 | < th | dose independent | sin | 4 | NA |
| 232 | 173.23 | wind | 1 | 14400 | > th | dose independent | sin | 4 | NA |
| 239 | 173.25 | humidity | 60 | 14400 | < th | dose dependent | rect. | 19 | 18 |
| 241 | 173.26 | humidity | 60 | 14400 | < th | dose dependent | rect. | 7 | 6 |
| 254 | 173.26 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 18 |
| 275 | 173.34 | humidity | 50 | 14400 | > th | dose independent | sin | 3 | NA |
| 307 | 173.44 | humidity | 50 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 309 | 173.44 | humidity | 50 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 313 | 173.44 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 328 | 173.46 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 379 | 173.57 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 392 | 173.60 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 397 | 173.62 | humidity | 50 | 14400 | > th | dose independent | sin | 9 | NA |
| 434 | 173.69 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 19 |
| 442 | 173.70 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 17 |
| 456 | 173.71 | humidity | 50 | 14400 | > th | dose independent | no | NA | NA |
| 487 | 173.71 | humidity | 50 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 580 | 173.78 | humidity | 50 | 14400 | < th | dose independent | sin | 9 | NA |
| 643 | 173.83 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 18 |
| 668 | 173.89 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 18 |
| 674 | 173.90 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 14 | 6 |
| 685 | 173.91 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 21 |
| 698 | 173.94 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 718 | 173.96 | humidity | 60 | 14400 | < th | dose dependent | sin | 8 | NA |
| 745 | 173.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 14 |
| 757 | 174.01 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 780 | 174.05 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 786 | 174.06 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 789 | 174.07 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 790 | 174.07 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 794 | 174.08 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 880 | 174.11 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 890 | 174.12 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 892 | 174.12 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 962 | 174.16 | wind | 1 | 14400 | > th | dose dependent | rect. | 6 | 1 |