Os03g0114300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os03g0114300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.31 | 0.271 | 12 | -0.674 | 1.37 | -0.894 | 0.174 | -0.947 | 0.108 | 3.81 | 23 | 48 | -- | -- |
| 34.31 | 0.275 | 12 | -0.769 | 1.36 | -0.755 | -0.0829 | -- | 0.0916 | 3.81 | 22.9 | 43 | -- | -- |
| 33.27 | 0.271 | 12 | -0.684 | 1.37 | -0.893 | -- | -0.858 | 0.107 | 3.79 | 22.76 | 35 | -- | -- |
| 34.33 | 0.275 | 12 | -0.767 | 1.36 | -0.758 | -- | -- | 0.093 | 3.82 | 22.84 | 30 | -- | -- |
| 121.12 | 0.513 | 12 | -0.814 | -- | -1.24 | -- | -1.29 | 0.0997 | -- | 20.32 | 2573 | -- | -- |
| 41.23 | 0.301 | 12 | -0.617 | 1.28 | -- | -0.0459 | -- | 0.188 | 4.05 | -- | -- | -- | -- |
| 41.23 | 0.301 | 12 | -0.616 | 1.28 | -- | -- | -- | 0.189 | 4.05 | -- | -- | -- | -- |
| 119.64 | 0.509 | 12 | -0.878 | -- | -0.762 | -- | -- | 0.0207 | -- | 26.32 | 2608 | -- | -- |
| 48.57 | 0.326 | 12 | -- | 1.31 | -0.458 | -- | -- | 0.211 | 3.91 | 22.7 | 17 | -- | -- |
| 130.49 | 0.534 | 12 | -0.564 | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
| 51.24 | 0.335 | 11.9 | -- | 1.27 | -- | -- | -- | 0.257 | 4.06 | -- | -- | -- | -- |
| 119.58 | 0.509 | 11.9 | -- | -- | 1.1 | -- | -- | 0.413 | -- | 34.2 | 6 | -- | -- |
| 138.89 | 0.55 | 11.9 | -- | -- | -- | -- | -- | 0.285 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.48 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 16 | 32.82 | temperature | 25 | 270 | < th | dose dependent | sin | 16 | NA |
| 43 | 33.16 | temperature | 25 | 10 | < th | dose dependent | sin | 13 | NA |
| 54 | 33.19 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 57 | 33.20 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 59 | 33.22 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 106 | 33.37 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 117 | 33.43 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 229 | 33.95 | temperature | 25 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 265 | 34.06 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 13 |
| 268 | 34.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 4 |
| 282 | 34.11 | temperature | 20 | 30 | > th | dose independent | sin | 13 | NA |
| 323 | 34.21 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 328 | 34.22 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 364 | 34.32 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 6 |
| 382 | 34.36 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 393 | 34.39 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 404 | 34.40 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 422 | 34.43 | wind | 5 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 423 | 34.43 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 424 | 34.43 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 463 | 34.50 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 487 | 34.53 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 490 | 34.53 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 493 | 34.54 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 498 | 34.54 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 513 | 34.56 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 515 | 34.57 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 519 | 34.57 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 521 | 34.58 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 528 | 34.58 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 529 | 34.59 | temperature | 20 | 30 | < th | dose independent | sin | 13 | NA |
| 536 | 34.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 548 | 34.62 | temperature | 20 | 30 | > th | dose independent | rect. | 3 | 23 |
| 586 | 34.67 | humidity | 90 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 592 | 34.68 | temperature | 20 | 30 | < th | dose independent | rect. | 9 | 19 |
| 603 | 34.69 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 23 |
| 640 | 34.74 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 665 | 34.79 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 708 | 34.82 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 11 |
| 720 | 34.83 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 733 | 34.84 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 739 | 34.85 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 763 | 34.87 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 764 | 34.87 | wind | 3 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 803 | 34.89 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 870 | 34.94 | temperature | 10 | 10 | > th | dose dependent | sin | 12 | NA |
| 879 | 34.95 | temperature | 20 | 30 | < th | dose independent | rect. | 6 | 22 |
| 942 | 35.00 | wind | 3 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 981 | 35.03 | temperature | 20 | 30 | > th | dose independent | no | NA | NA |