Os03g0113700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat shock 70 kDa protein, mitochondrial precursor.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0113700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Heat shock 70 kDa protein, mitochondrial precursor.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.58 | 0.455 | 11.1 | 1.31 | 1.44 | 2.34 | 1.33 | 2.18 | 0.484 | 10.8 | 14.7 | 7 | -- | -- |
| 96.67 | 0.458 | 11.1 | 0.99 | 1.44 | 2.37 | 1.79 | -- | 0.405 | 10.9 | 13.28 | 5 | -- | -- |
| 99.33 | 0.464 | 11.1 | 1.54 | 1.43 | 2.28 | -- | 3.38 | 0.531 | 10.8 | 15.3 | 4 | -- | -- |
| 109.61 | 0.488 | 11.1 | 1.07 | 1.42 | 2.19 | -- | -- | 0.398 | 10.8 | 16.73 | 3 | -- | -- |
| 207.03 | 0.67 | 11.2 | 1.29 | -- | 3.52 | -- | 3.43 | 0.368 | -- | 13.87 | 2 | -- | -- |
| 149.6 | 0.573 | 11.1 | 1.45 | 1.94 | -- | 1.97 | -- | 0.734 | 12 | -- | -- | -- | -- |
| 166.49 | 0.604 | 11.1 | 1.53 | 1.94 | -- | -- | -- | 0.743 | 11.9 | -- | -- | -- | -- |
| 213.76 | 0.681 | 11.2 | 0.897 | -- | 2.91 | -- | -- | 0.247 | -- | 19.27 | 2 | -- | -- |
| 136.54 | 0.544 | 11.2 | -- | 1.35 | 2.8 | -- | -- | 0.224 | 10.5 | 15.3 | 5 | -- | -- |
| 402.51 | 0.937 | 11.1 | 1.47 | -- | -- | -- | -- | 0.717 | -- | -- | -- | -- | -- |
| 228.09 | 0.706 | 11.1 | -- | 1.92 | -- | -- | -- | 0.573 | 11.9 | -- | -- | -- | -- |
| 232.84 | 0.711 | 11.2 | -- | -- | 3.41 | -- | -- | 0.115 | -- | 17.11 | 2 | -- | -- |
| 459.49 | 1 | 11.1 | -- | -- | -- | -- | -- | 0.554 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.76 | temperature | 10 | 10 | > th | dose dependent | sin | 4 | NA |
| 11 | 82.57 | temperature | 30 | 10 | < th | dose dependent | sin | 4 | NA |
| 26 | 84.92 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 53 | 87.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 55 | 87.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 72 | 89.04 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 121 | 91.13 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 139 | 91.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 143 | 92.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 152 | 92.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 185 | 93.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 186 | 93.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 194 | 93.89 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 212 | 94.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 214 | 94.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 219 | 94.59 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 226 | 94.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 229 | 94.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 247 | 95.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 258 | 95.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 267 | 95.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 285 | 96.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 302 | 96.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 309 | 96.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 317 | 96.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 341 | 97.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 357 | 97.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 402 | 98.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 457 | 99.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 568 | 101.41 | temperature | 25 | 90 | > th | dose independent | rect. | 19 | 23 |
| 583 | 101.55 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 22 |
| 602 | 101.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 649 | 102.45 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 23 |
| 676 | 102.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 775 | 103.89 | temperature | 25 | 90 | < th | dose independent | rect. | 2 | 17 |
| 800 | 104.25 | temperature | 25 | 90 | < th | dose independent | rect. | 2 | 19 |
| 817 | 104.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 834 | 104.62 | temperature | 25 | 90 | > th | dose independent | rect. | 5 | 22 |
| 871 | 105.01 | temperature | 25 | 90 | < th | dose independent | rect. | 9 | 23 |
| 925 | 105.49 | temperature | 25 | 90 | < th | dose independent | sin | 5 | NA |
| 947 | 105.73 | temperature | 25 | 90 | > th | dose independent | sin | 5 | NA |
| 960 | 105.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 992 | 106.16 | temperature | 25 | 90 | < th | dose independent | no | NA | NA |