Os03g0111400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os03g0111400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.26 | 0.606 | 8.07 | -1.61 | 0.84 | 1.56 | -0.0748 | 8.93 | -0.2 | 3.98 | 0.8521 | 1440 | 18.1 | 10.9 |
| 208.44 | 0.672 | 8.07 | -0.151 | 0.82 | 1.21 | -0.00517 | -- | 0.0336 | 4.13 | 0.7949 | 1436 | 18 | 11.6 |
| 166.24 | 0.601 | 8.07 | -1.58 | 0.867 | 1.59 | -- | 8.96 | -0.172 | 3.96 | 0.8301 | 1439 | 18.1 | 10.8 |
| 206.81 | 0.67 | 8.08 | -0.232 | 0.819 | 1.37 | -- | -- | 0.0164 | 3.68 | 0.7581 | 1427 | 18 | 11.6 |
| 201.18 | 0.661 | 8.08 | -1.57 | -- | 1.72 | -- | 8.98 | -0.165 | -- | 0.7227 | 1442 | 18.1 | 10.8 |
| 246.9 | 0.737 | 8.17 | -0.0277 | 0.727 | -- | -0.212 | -- | -0.119 | 4.18 | -- | -- | -- | -- |
| 247.03 | 0.736 | 8.17 | -0.0256 | 0.726 | -- | -- | -- | -0.117 | 4.14 | -- | -- | -- | -- |
| 221.6 | 0.693 | 8.05 | -0.172 | -- | 1.37 | -- | -- | -0.0683 | -- | 0.9611 | 6192 | 17.7 | 12.1 |
| 206.41 | 0.669 | 8.08 | -- | 0.843 | 1.34 | -- | -- | 0.0156 | 3.46 | 0.8542 | 1422 | 17.9 | 11.8 |
| 275.58 | 0.776 | 8.17 | 0.00373 | -- | -- | -- | -- | -0.0981 | -- | -- | -- | -- | -- |
| 247.04 | 0.735 | 8.17 | -- | 0.725 | -- | -- | -- | -0.115 | 4.14 | -- | -- | -- | -- |
| 213.25 | 0.68 | 8.13 | -- | -- | 1.53 | -- | -- | 0.0269 | -- | 2.401 | 6168 | 16.2 | 14.7 |
| 275.58 | 0.775 | 8.17 | -- | -- | -- | -- | -- | -0.0985 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.62 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 14 | 165.25 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 18 | 169.57 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 19 | 170.23 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 23 | 170.72 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 29 | 171.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 33 | 172.55 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 39 | 172.91 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 41 | 172.98 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 43 | 174.06 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 54 | 175.04 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 57 | 175.06 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 62 | 175.11 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 88 | 177.97 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 89 | 178.30 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 118 | 179.29 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 132 | 179.88 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 157 | 180.80 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 160 | 181.09 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 163 | 181.19 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 164 | 181.19 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 23 | 19 |
| 168 | 181.22 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 3 | 8 |
| 171 | 181.23 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 176 | 181.27 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 178 | 181.28 | temperature | 20.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 179 | 181.28 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 183 | 181.29 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 195 | 181.34 | temperature | 20.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 233 | 181.44 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 351 | 182.00 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 368 | 182.11 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 373 | 182.14 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 376 | 182.15 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 435 | 182.31 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 439 | 182.32 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 462 | 182.38 | temperature | 20.0 | 14400 | < th | dose independent | no | NA | NA |
| 486 | 182.45 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 488 | 182.45 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 495 | 182.47 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 512 | 182.54 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 582 | 182.76 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 589 | 182.78 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 599 | 182.81 | temperature | 20.0 | 14400 | > th | dose independent | no | NA | NA |
| 655 | 182.97 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 657 | 182.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 14 |
| 686 | 183.13 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 17 | 13 |
| 697 | 183.15 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 712 | 183.21 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 713 | 183.21 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 717 | 183.22 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 725 | 183.24 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 756 | 183.36 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 761 | 183.39 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 768 | 183.40 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 794 | 183.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 795 | 183.54 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 19 |
| 845 | 183.72 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 17 |
| 910 | 183.98 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 911 | 183.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 952 | 184.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 953 | 184.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 2 |