Os03g0108800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell division control protein 2 homolog 1 (EC 2.7.1.37).
FiT-DB / Search/ Help/ Sample detail
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Os03g0108800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cell division control protein 2 homolog 1 (EC 2.7.1.37).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.14 | 0.206 | 11 | -1.81 | 0.672 | 0.356 | -0.578 | -0.515 | -0.497 | 2.32 | 25.14 | 4716 | -- | -- |
| 19.28 | 0.205 | 11 | -1.71 | 0.684 | 0.302 | -0.589 | -- | -0.467 | 2.27 | 26.12 | 4754 | -- | -- |
| 20.36 | 0.21 | 11 | -1.78 | 0.669 | 0.345 | -- | -0.466 | -0.493 | 2.27 | 24.86 | 4713 | -- | -- |
| 20.44 | 0.211 | 11 | -1.66 | 0.667 | 0.297 | -- | -- | -0.461 | 2.23 | 25.46 | 4721 | -- | -- |
| 45.4 | 0.314 | 11 | -1.78 | -- | 0.424 | -- | -0.368 | -0.496 | -- | 24.31 | 5433 | -- | -- |
| 22.31 | 0.221 | 11 | -1.57 | 0.676 | -- | -0.548 | -- | -0.454 | 2.22 | -- | -- | -- | -- |
| 23.42 | 0.227 | 11 | -1.56 | 0.674 | -- | -- | -- | -0.45 | 2.17 | -- | -- | -- | -- |
| 44.69 | 0.311 | 11 | -1.69 | -- | 0.441 | -- | -- | -0.478 | -- | 23.79 | 3974 | -- | -- |
| 50.25 | 0.33 | 10.9 | -- | 0.686 | -0.976 | -- | -- | 0.0179 | 2.12 | 11.63 | 47520 | -- | -- |
| 50.56 | 0.332 | 11 | -1.53 | -- | -- | -- | -- | -0.434 | -- | -- | -- | -- | -- |
| 87.44 | 0.437 | 11 | -- | 0.645 | -- | -- | -- | -0.277 | 2.11 | -- | -- | -- | -- |
| 78.36 | 0.412 | 10.9 | -- | -- | -0.937 | -- | -- | 0.0162 | -- | 6.888 | 47520 | -- | -- |
| 112.33 | 0.495 | 11 | -- | -- | -- | -- | -- | -0.264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.41 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 16 |
| 2 | 18.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 8 | 18.54 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 9 | 18.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 10 | 18.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 11 | 18.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 16 | 18.59 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 25 | 18.61 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 38 | 18.64 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 47 | 18.66 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 19 |
| 55 | 18.68 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 67 | 18.70 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 68 | 18.70 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 70 | 18.70 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 71 | 18.70 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 82 | 18.71 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 90 | 18.72 | radiation | 10.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 97 | 18.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 128 | 18.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 135 | 18.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 136 | 18.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 137 | 18.75 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 141 | 18.75 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 18 | NA |
| 144 | 18.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 153 | 18.76 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 155 | 18.76 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 8 |
| 170 | 18.76 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 176 | 18.77 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 180 | 18.77 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 199 | 18.79 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 200 | 18.79 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 219 | 18.79 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 220 | 18.79 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 227 | 18.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 228 | 18.80 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 230 | 18.80 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 247 | 18.80 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 252 | 18.81 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 271 | 18.81 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 278 | 18.81 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 316 | 18.82 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 318 | 18.82 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 320 | 18.82 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 323 | 18.82 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 330 | 18.82 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 2 | 9 |
| 339 | 18.83 | radiation | 10.0 | 14400 | < th | dose independent | no | NA | NA |
| 340 | 18.83 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 344 | 18.83 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 417 | 18.83 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 451 | 18.84 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 455 | 18.85 | radiation | 30.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 457 | 18.85 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 511 | 18.86 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 515 | 18.86 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 555 | 18.88 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 582 | 18.88 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 604 | 18.88 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 660 | 18.89 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 663 | 18.89 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 675 | 18.90 | radiation | 10.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 711 | 18.90 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 715 | 18.90 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 772 | 18.91 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 773 | 18.91 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 844 | 18.91 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 21 |
| 903 | 18.93 | radiation | 40.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 905 | 18.93 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 999 | 18.94 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 12 | 1 |