Os03g0107000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0107000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.64 | 0.478 | 9.21 | -0.0243 | 0.387 | -0.855 | -0.907 | -2.03 | -0.0258 | 15.6 | 68 | 5463 | -- | -- |
| 109.28 | 0.487 | 9.21 | 0.0256 | 0.415 | -0.982 | -0.792 | -- | -0.0124 | 15.8 | 68 | 5416 | -- | -- |
| 106.15 | 0.48 | 9.22 | -0.0361 | 0.384 | -0.85 | -- | -1.94 | -0.031 | 15.7 | 68.32 | 5463 | -- | -- |
| 111.34 | 0.491 | 9.22 | 0.0272 | 0.413 | -0.995 | -- | -- | -0.0135 | 15.8 | 68.11 | 5412 | -- | -- |
| 114.24 | 0.498 | 9.21 | -0.0564 | -- | -0.927 | -- | -1.95 | -0.033 | -- | 68.18 | 5476 | -- | -- |
| 123.49 | 0.521 | 9.23 | 0.0754 | 0.445 | -- | -0.718 | -- | -0.0605 | 15.2 | -- | -- | -- | -- |
| 125.14 | 0.524 | 9.23 | 0.0612 | 0.44 | -- | -- | -- | -0.0648 | 15.1 | -- | -- | -- | -- |
| 119.55 | 0.509 | 9.22 | 0.0118 | -- | -1.06 | -- | -- | -0.0191 | -- | 68.15 | 5469 | -- | -- |
| 111.34 | 0.491 | 9.22 | -- | 0.391 | -0.986 | -- | -- | -0.0189 | 15.8 | 68.63 | 5416 | -- | -- |
| 136.2 | 0.545 | 9.23 | 0.0424 | -- | -- | -- | -- | -0.0763 | -- | -- | -- | -- | -- |
| 125.24 | 0.524 | 9.23 | -- | 0.439 | -- | -- | -- | -0.0716 | 15.1 | -- | -- | -- | -- |
| 119.55 | 0.509 | 9.22 | -- | -- | -1.06 | -- | -- | -0.0205 | -- | 68.83 | 5469 | -- | -- |
| 136.25 | 0.545 | 9.23 | -- | -- | -- | -- | -- | -0.0811 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 91.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 91.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 4 | 91.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 93.06 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 6 | 94.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 7 | 94.90 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 8 | 95.01 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 10 | 95.06 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 11 | 95.06 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 12 | 95.12 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 13 | 95.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 14 | 95.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 19 | 95.25 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 22 | 95.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 23 | 95.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 24 | 95.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 25 | 95.46 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 26 | 95.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 27 | 95.46 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 29 | 95.51 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 30 | 95.51 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 33 | 95.63 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 64 | 96.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 65 | 96.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 66 | 96.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 71 | 96.26 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 87 | 96.57 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 88 | 96.57 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 97 | 96.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 99 | 96.73 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 104 | 96.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 105 | 96.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 110 | 96.84 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 112 | 96.94 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 113 | 96.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 115 | 97.00 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 117 | 97.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 118 | 97.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 120 | 97.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 122 | 97.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 130 | 97.13 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 145 | 97.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 146 | 97.36 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 148 | 97.40 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 180 | 97.75 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 181 | 97.75 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 186 | 97.79 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 193 | 97.88 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 216 | 98.25 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 243 | 98.52 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 251 | 98.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 252 | 98.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 253 | 98.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 261 | 98.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 274 | 98.94 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 289 | 99.04 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 291 | 99.04 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 303 | 99.11 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 312 | 99.16 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 316 | 99.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 355 | 99.37 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 362 | 99.39 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 364 | 99.40 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 368 | 99.43 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 377 | 99.50 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 406 | 99.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 408 | 99.68 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 412 | 99.70 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 417 | 99.72 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 418 | 99.72 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 428 | 99.77 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 13 |
| 434 | 99.80 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 442 | 99.85 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 450 | 99.88 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 454 | 99.89 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 469 | 99.92 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 485 | 100.01 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 489 | 100.02 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 11 |
| 518 | 100.15 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 523 | 100.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 525 | 100.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 15 |
| 529 | 100.18 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 568 | 100.32 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 11 |
| 571 | 100.32 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 11 |
| 582 | 100.38 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 599 | 100.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 600 | 100.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 602 | 100.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 604 | 100.45 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 616 | 100.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 623 | 100.50 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 624 | 100.50 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 7 |
| 628 | 100.51 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 632 | 100.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 633 | 100.51 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 637 | 100.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 692 | 100.63 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 699 | 100.65 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 700 | 100.65 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 701 | 100.65 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 703 | 100.66 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 726 | 100.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 731 | 100.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 732 | 100.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 733 | 100.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 776 | 100.86 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 778 | 100.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 837 | 101.01 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 840 | 101.01 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 869 | 101.08 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 957 | 101.29 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 5 | NA |