Os03g0104800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0104800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.05 | 0.418 | 8.92 | -1.21 | 0.616 | -0.502 | -0.974 | -0.233 | -0.0553 | 14 | 20.5 | 15 | -- | -- |
| 79.23 | 0.415 | 8.93 | -1.24 | 0.611 | -0.483 | -0.874 | -- | -0.0684 | 14 | 20.6 | 16 | -- | -- |
| 81.94 | 0.422 | 8.93 | -1.3 | 0.619 | -0.466 | -- | 0.177 | -0.0783 | 14.1 | 20.7 | 18 | -- | -- |
| 81.9 | 0.422 | 8.93 | -1.28 | 0.603 | -0.474 | -- | -- | -0.0775 | 14.1 | 20.84 | 40 | -- | -- |
| 101.56 | 0.469 | 8.93 | -1.34 | -- | -0.614 | -- | 0.312 | -0.0923 | -- | 21 | 27 | -- | -- |
| 89.44 | 0.443 | 8.9 | -1.12 | 0.732 | -- | -0.814 | -- | 0.0294 | 13.9 | -- | -- | -- | -- |
| 92 | 0.449 | 8.91 | -1.15 | 0.733 | -- | -- | -- | 0.0249 | 14 | -- | -- | -- | -- |
| 100.79 | 0.468 | 8.95 | -1.38 | -- | -0.64 | -- | -- | -0.153 | -- | 21.47 | 10 | -- | -- |
| 122.69 | 0.516 | 8.89 | -- | 0.672 | -0.291 | -- | -- | 0.105 | 14.1 | 20.9 | 22 | -- | -- |
| 124.35 | 0.521 | 8.92 | -1.18 | -- | -- | -- | -- | 0.00786 | -- | -- | -- | -- | -- |
| 126.84 | 0.527 | 8.88 | -- | 0.754 | -- | -- | -- | 0.153 | 14 | -- | -- | -- | -- |
| 147.29 | 0.565 | 8.91 | -- | -- | -0.508 | -- | -- | 0.0411 | -- | 20.9 | 22 | -- | -- |
| 161.1 | 0.592 | 8.89 | -- | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.76 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 2 | 68.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 5 | 69.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 7 | 69.92 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 17 |
| 14 | 70.25 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 15 |
| 19 | 70.63 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 28 | 70.95 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 29 | 70.99 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 43 | 71.42 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 48 | 71.53 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 59 | 71.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 70 | 72.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 80 | 72.45 | radiation | 30.0 | 30 | < th | dose independent | rect. | 3 | 6 |
| 84 | 72.53 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 87 | 72.58 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 6 |
| 90 | 72.65 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 91 | 72.66 | humidity | 70.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 101 | 72.87 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 102 | 72.88 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 116 | 72.89 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 118 | 72.91 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 18 |
| 121 | 72.93 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 122 | 72.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 123 | 72.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 128 | 72.95 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 6 |
| 129 | 72.95 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 6 |
| 133 | 72.99 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 139 | 73.02 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 145 | 73.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 146 | 73.08 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 156 | 73.21 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 166 | 73.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 171 | 73.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 172 | 73.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 181 | 73.29 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 189 | 73.33 | humidity | 70.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 190 | 73.33 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 193 | 73.35 | wind | 7.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 197 | 73.37 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 12 |
| 198 | 73.38 | radiation | 1.0 | 270 | < th | dose independent | sin | 4 | NA |
| 214 | 73.40 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 216 | 73.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 8 |
| 217 | 73.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 228 | 73.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 230 | 73.43 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 233 | 73.43 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 237 | 73.46 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 239 | 73.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 241 | 73.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 242 | 73.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 244 | 73.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 245 | 73.47 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 250 | 73.50 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 252 | 73.50 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 6 |
| 253 | 73.50 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 255 | 73.50 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 256 | 73.50 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 6 |
| 259 | 73.50 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 18 |
| 260 | 73.50 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 18 |
| 263 | 73.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 265 | 73.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 269 | 73.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 288 | 73.59 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 289 | 73.59 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 293 | 73.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 294 | 73.62 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 295 | 73.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 301 | 73.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 310 | 73.69 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 315 | 73.72 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 317 | 73.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 320 | 73.72 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 323 | 73.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 329 | 73.72 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 332 | 73.73 | radiation | 1.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 343 | 73.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 346 | 73.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 360 | 73.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 363 | 73.88 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 369 | 73.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 370 | 73.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 371 | 73.90 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 378 | 73.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 379 | 73.93 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 394 | 73.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 421 | 74.05 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 18 |
| 435 | 74.11 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 18 | 9 |
| 450 | 74.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 470 | 74.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 473 | 74.22 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 6 |
| 485 | 74.27 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 488 | 74.27 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 489 | 74.27 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 490 | 74.27 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 18 |
| 496 | 74.28 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 514 | 74.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 544 | 74.42 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 592 | 74.48 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 6 |
| 601 | 74.53 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 635 | 74.63 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 660 | 74.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 680 | 74.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 684 | 74.74 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 751 | 74.87 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 771 | 74.90 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 806 | 74.93 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 826 | 74.97 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 15 |
| 858 | 75.03 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 880 | 75.09 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 18 |
| 899 | 75.13 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 919 | 75.18 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 934 | 75.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 969 | 75.22 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 16 |