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Os03g0102600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.89 (0.0364) R2 : 0.924
β1 : -2.49 (0.133) R2dD : 0.0597 R2D : 0.0734
β2 : 2.67 (0.102) R2dC : 0.132 R2C : 0.323
β3 : -4.16 (0.079) R2dE : 0.531 R2E : 0.727
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.196 (0.0778) R2dN8 : 0.0014 R2N8 : 0.00143
σ : 0.681
deviance : 213.72
__
_____
C
peak time of C : 17.8
E
wheather : radiation
threshold : 20.32
memory length : 291
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 15.8
open length of G : 13.7

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
197.92 0.661 7.88 -2.43 2.57 -4.13 2.45 1.27 0.203 17.8 17.97 282 15.9 13.8
205.18 0.667 7.88 -2.36 2.65 -4.17 1.94 -- 0.245 17.8 20.23 291 15.8 13.7
210.4 0.676 7.9 -2.48 2.7 -4.06 -- 0.866 0.165 17.7 17.68 282 15.9 13.7
213.72 0.681 7.89 -2.49 2.67 -4.16 -- -- 0.196 17.8 20.32 291 15.8 13.7
287.95 0.79 7.87 -2.57 -- -5.69 -- 0.127 0.0716 -- 62.3 407 16.6 13.4
286.67 0.794 7.85 -2.5 6.35 -- -0.0664 -- 0.132 14.9 -- -- -- --
286.68 0.793 7.85 -2.5 6.35 -- -- -- 0.131 14.9 -- -- -- --
287.39 0.79 7.84 -2.51 -- -5.69 -- -- 0.135 -- 84.48 411 16.6 13.4
375.62 0.903 7.85 -- 2.79 -4.14 -- -- 0.476 17.8 23.53 303 15.8 13.7
2612.76 2.39 7.88 -2.78 -- -- -- -- -0.0318 -- -- -- -- --
452.04 0.995 7.79 -- 6.4 -- -- -- 0.41 14.9 -- -- -- --
453.73 0.992 7.79 -- -- -5.71 -- -- 0.409 -- 92.45 409 16.6 13.4
2815.96 2.48 7.81 -- -- -- -- -- 0.276 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 203.88 radiation 40.0 270 < th dose dependent rect. 16 14
3 204.80 radiation 20.0 270 < th dose independent rect. 16 14
7 208.87 temperature 10.0 270 > th dose independent rect. 5 11
8 208.87 atmosphere 1015.0 270 < th dose independent rect. 5 11
9 208.87 temperature 10.0 270 > th dose independent rect. 16 13
10 208.87 radiation 40.0 270 < th dose independent rect. 16 13
18 209.38 precipitation 0.1 270 < th dose independent rect. 5 11
19 209.38 precipitation 0.1 270 < th dose dependent rect. 5 11
24 209.94 wind 9.0 270 < th dose independent rect. 16 14
26 210.55 wind 1.0 270 > th dose independent rect. 5 11
27 210.72 wind 9.0 270 < th dose independent rect. 6 10
30 211.19 humidity 50.0 270 > th dose independent rect. 16 14
31 211.30 atmosphere 995.0 270 > th dose independent rect. 16 14
35 212.71 atmosphere 995.0 270 > th dose independent rect. 6 10
39 213.31 radiation 1.0 90 < th dose independent rect. 3 19
40 213.47 temperature 15.0 270 > th dose independent rect. 24 22
41 213.82 temperature 15.0 270 > th dose independent rect. 1 20
44 214.51 radiation 1.0 90 < th dose dependent rect. 3 19
45 215.28 precipitation 0.1 270 < th dose independent rect. 16 14
46 215.28 precipitation 0.1 270 < th dose dependent rect. 16 14
48 215.56 humidity 50.0 90 > th dose dependent rect. 22 5
59 216.40 humidity 50.0 270 > th dose dependent rect. 22 2
62 216.73 temperature 15.0 90 > th dose independent rect. 3 19
65 217.33 humidity 80.0 90 > th dose independent rect. 22 5
70 217.59 temperature 15.0 270 > th dose independent rect. 1 10
73 217.69 humidity 50.0 270 > th dose independent rect. 6 10
74 217.75 humidity 60.0 10 > th dose dependent rect. 22 5
77 217.90 atmosphere 1000.0 270 > th dose independent rect. 22 2
80 218.01 atmosphere 1000.0 90 > th dose independent rect. 22 5
84 218.29 radiation 1.0 270 < th dose dependent rect. 21 4
85 218.30 temperature 10.0 270 > th dose independent rect. 21 4
86 218.30 temperature 30.0 270 < th dose independent rect. 21 4
87 218.30 humidity 50.0 270 > th dose independent rect. 21 4
91 218.30 radiation 1.0 270 < th dose independent rect. 21 4
102 218.36 precipitation 0.1 270 < th dose independent rect. 21 4
103 218.36 precipitation 0.1 270 < th dose dependent rect. 21 4
105 218.38 wind 9.0 270 < th dose independent rect. 21 4
106 218.53 precipitation 0.1 270 < th dose independent rect. 11 14
107 218.53 precipitation 0.1 270 < th dose dependent rect. 11 14
109 218.81 wind 9.0 270 < th dose dependent rect. 22 2
110 218.88 precipitation 0.1 270 < th dose independent rect. 22 2
111 218.88 precipitation 0.1 270 < th dose dependent rect. 22 2
113 218.94 temperature 10.0 270 > th dose independent rect. 22 2
114 218.94 temperature 30.0 270 < th dose independent rect. 22 2
115 218.94 humidity 50.0 270 > th dose independent rect. 22 2
119 218.94 radiation 1.0 270 < th dose independent rect. 22 2
126 218.94 radiation 1.0 270 < th dose dependent rect. 22 2
143 218.95 atmosphere 1015.0 90 < th dose independent rect. 3 19
150 218.98 wind 9.0 270 < th dose independent rect. 22 2
152 219.05 temperature 15.0 270 > th dose independent rect. 10 11
154 219.09 atmosphere 1015.0 270 < th dose independent rect. 1 20
156 219.15 wind 9.0 90 < th dose dependent rect. 22 5
169 219.74 radiation 30.0 14400 < th dose dependent rect. 23 5
171 219.78 radiation 1.0 90 < th dose dependent rect. 15 6
173 219.83 wind 9.0 270 < th dose independent rect. 11 14
174 219.83 temperature 10.0 270 > th dose dependent rect. 22 2
175 219.84 wind 9.0 270 < th dose independent rect. 1 10
177 219.85 atmosphere 995.0 270 > th dose independent rect. 1 10
178 219.85 atmosphere 1015.0 270 < th dose independent rect. 1 10
179 219.85 temperature 10.0 270 > th dose independent rect. 11 14
203 219.95 wind 9.0 90 < th dose independent rect. 3 19
204 220.08 wind 9.0 270 < th dose independent rect. 1 20
205 220.08 wind 9.0 10 < th dose dependent rect. 22 5
206 220.11 precipitation 0.1 270 < th dose independent rect. 1 10
208 220.11 precipitation 0.1 270 < th dose dependent rect. 1 10
210 220.18 atmosphere 1000.0 270 > th dose independent rect. 21 13
212 220.24 humidity 50.0 270 > th dose independent rect. 1 10
215 220.37 atmosphere 995.0 270 > th dose independent rect. 1 20
216 220.40 atmosphere 995.0 90 > th dose independent rect. 3 19
223 220.76 atmosphere 1000.0 10 > th dose independent rect. 22 5
226 220.83 wind 9.0 10 < th dose independent rect. 22 5
227 220.83 temperature 10.0 10 > th dose independent rect. 22 5
228 220.83 temperature 30.0 10 < th dose independent rect. 22 5
229 220.83 humidity 50.0 10 > th dose independent rect. 22 5
233 220.83 radiation 1.0 10 < th dose independent rect. 22 5
238 220.83 temperature 10.0 10 > th dose independent rect. 3 19
240 220.83 atmosphere 1015.0 10 < th dose independent rect. 3 19
241 220.83 radiation 1.0 10 < th dose dependent rect. 22 5
253 221.09 precipitation 0.1 10 < th dose independent rect. 22 5
254 221.09 precipitation 0.1 10 < th dose dependent rect. 22 5
256 221.11 precipitation 0.1 10 < th dose independent rect. 3 19
258 221.11 precipitation 0.1 10 < th dose dependent rect. 3 19
259 221.15 precipitation 0.1 270 < th dose independent rect. 1 20
260 221.15 precipitation 0.1 270 < th dose dependent rect. 1 20
297 221.41 radiation 1.0 270 < th dose independent rect. 24 21
298 221.41 radiation 30.0 270 < th dose dependent rect. 15 5
305 221.56 radiation 1.0 90 < th dose independent rect. 15 6
312 221.73 atmosphere 995.0 10 > th dose independent rect. 3 19
318 221.91 atmosphere 1000.0 270 > th dose independent rect. 20 20
320 221.93 temperature 10.0 1440 > th dose independent rect. 23 5
323 221.93 temperature 30.0 1440 < th dose independent rect. 23 5
327 221.93 humidity 50.0 1440 > th dose independent rect. 23 5
336 221.93 atmosphere 995.0 1440 > th dose independent rect. 23 5
337 221.93 radiation 1.0 1440 < th dose independent rect. 23 5
357 221.93 temperature 10.0 1440 > th dose independent rect. 4 19
381 222.41 atmosphere 1000.0 270 > th dose independent rect. 21 18
406 222.89 humidity 50.0 270 > th dose independent rect. 24 21
428 223.01 radiation 20.0 270 < th dose independent rect. 15 5
435 223.10 temperature 30.0 270 < th dose independent rect. 21 13
481 223.52 temperature 10.0 270 > th dose independent rect. 21 13
483 223.55 humidity 50.0 270 > th dose independent rect. 21 13
503 223.86 atmosphere 1015.0 270 < th dose independent rect. 22 2
504 223.89 wind 9.0 270 < th dose independent rect. 21 13
553 224.30 atmosphere 1015.0 90 < th dose independent rect. 22 5
558 224.45 wind 1.0 270 > th dose independent rect. 10 11
564 224.53 precipitation 0.1 270 < th dose independent rect. 21 13
565 224.53 precipitation 0.1 270 < th dose dependent rect. 21 13
592 224.72 humidity 50.0 270 > th dose independent rect. 16 4
604 224.92 temperature 10.0 270 > th dose dependent rect. 1 8
605 224.93 temperature 10.0 10 > th dose dependent rect. 22 5
609 224.98 temperature 15.0 270 > th dose independent rect. 16 4
620 225.15 atmosphere 1015.0 10 < th dose independent rect. 22 5
627 225.27 temperature 15.0 270 > th dose independent rect. 15 6
664 225.57 humidity 50.0 90 > th dose independent rect. 3 19
667 225.59 atmosphere 995.0 270 > th dose dependent rect. 16 4
679 225.75 radiation 1.0 90 > th dose independent sin 23 NA
690 225.89 atmosphere 1010.0 270 < th dose independent rect. 16 4
724 226.07 precipitation 0.1 720 < th dose independent rect. 4 14
725 226.07 precipitation 0.1 720 < th dose dependent rect. 4 14
729 226.14 atmosphere 995.0 270 > th dose independent rect. 16 4
753 226.40 radiation 40.0 270 < th dose independent rect. 16 4
754 226.40 temperature 10.0 270 > th dose independent rect. 20 20
814 226.53 wind 1.0 270 > th dose independent rect. 20 20
818 226.60 atmosphere 1015.0 270 < th dose independent rect. 10 11
820 226.61 wind 9.0 270 < th dose independent rect. 10 11
845 226.84 precipitation 0.1 270 < th dose independent rect. 20 20
847 226.84 precipitation 0.1 270 < th dose dependent rect. 20 20
849 226.85 atmosphere 995.0 270 > th dose dependent rect. 22 2
854 226.89 wind 9.0 270 < th dose independent rect. 16 4
855 226.91 wind 1.0 270 > th dose independent rect. 16 4
877 226.99 temperature 10.0 720 > th dose independent rect. 18 10
878 226.99 humidity 50.0 720 > th dose independent rect. 18 10
879 226.99 radiation 20.0 720 < th dose independent rect. 18 10
882 226.99 temperature 10.0 720 > th dose independent rect. 4 14
883 226.99 atmosphere 1015.0 720 < th dose independent rect. 4 14
884 227.00 temperature 30.0 270 < th dose independent rect. 16 14
890 227.07 wind 1.0 270 > th dose independent rect. 21 3
893 227.08 wind 9.0 270 < th dose independent rect. 20 20
914 227.26 humidity 50.0 270 > th dose independent rect. 17 2
919 227.31 atmosphere 995.0 270 > th dose dependent rect. 21 4
920 227.32 temperature 15.0 720 > th dose independent rect. 17 20
935 227.44 radiation 1.0 270 > th dose independent rect. 6 10
936 227.44 radiation 40.0 720 < th dose dependent rect. 18 10
942 227.55 temperature 30.0 270 < th dose independent rect. 16 4
952 227.63 wind 7.0 720 < th dose independent rect. 22 10
956 227.65 wind 1.0 270 > th dose independent rect. 21 18
972 227.87 atmosphere 1010.0 270 < th dose independent rect. 15 6
974 227.88 wind 9.0 720 < th dose independent rect. 18 10
992 228.05 wind 9.0 720 < th dose independent rect. 5 4
993 228.05 temperature 10.0 720 > th dose independent rect. 5 4
994 228.05 humidity 50.0 720 > th dose independent rect. 5 4
995 228.05 atmosphere 995.0 720 > th dose independent rect. 5 4
996 228.05 atmosphere 1015.0 720 < th dose independent rect. 5 4
998 228.05 temperature 10.0 720 > th dose independent rect. 9 20