Os03g0101300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hexose transporter.
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Os03g0101300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hexose transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.24 | 0.368 | 11.4 | 0.842 | 1.34 | 2.66 | 0.417 | 1.98 | 0.35 | 0.777 | 19.43 | 5159 | -- | -- |
| 62.76 | 0.369 | 11.3 | 1.01 | 1.35 | 2.04 | 0.55 | -- | 0.454 | 0.727 | 20.05 | 5179 | -- | -- |
| 61.86 | 0.366 | 11.4 | 0.824 | 1.33 | 2.96 | -- | 2.45 | 0.334 | 0.813 | 19.07 | 5265 | -- | -- |
| 62.59 | 0.368 | 11.4 | 0.847 | 1.33 | 1.83 | -- | -- | 0.365 | 0.785 | 19.92 | 5228 | -- | -- |
| 170.28 | 0.608 | 11.4 | 0.873 | -- | 2.87 | -- | 2.35 | 0.357 | -- | 19.1 | 5982 | -- | -- |
| 89.44 | 0.443 | 11.4 | 0.0605 | 1.3 | -- | 0.485 | -- | 0.0943 | 0.761 | -- | -- | -- | -- |
| 90.43 | 0.445 | 11.4 | 0.0424 | 1.3 | -- | -- | -- | 0.0918 | 0.77 | -- | -- | -- | -- |
| 170.91 | 0.609 | 11.3 | 0.864 | -- | 1.81 | -- | -- | 0.376 | -- | 19.8 | 5994 | -- | -- |
| 73.7 | 0.4 | 11.4 | -- | 1.34 | 1.24 | -- | -- | 0.194 | 0.709 | 18.75 | 5198 | -- | -- |
| 196.53 | 0.655 | 11.4 | 0.0897 | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
| 90.48 | 0.445 | 11.4 | -- | 1.3 | -- | -- | -- | 0.0871 | 0.772 | -- | -- | -- | -- |
| 176.84 | 0.621 | 11.4 | -- | -- | 1.76 | -- | -- | 0.175 | -- | 19.8 | 5994 | -- | -- |
| 196.74 | 0.655 | 11.4 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.99 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 2 | 59.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 3 | 59.12 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 10 | 59.13 | humidity | 70.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 14 | 59.14 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 22 | 19 |
| 18 | 59.16 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 21 | 59.18 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 43 | 59.22 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 45 | 59.22 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 21 |
| 58 | 59.26 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 59 | 59.26 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 60 | 59.27 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 63 | 59.27 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 5 |
| 69 | 59.29 | humidity | 70.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 73 | 59.29 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 81 | 59.31 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 15 | 22 |
| 89 | 59.32 | humidity | 70.0 | 43200 | < th | dose independent | no | NA | NA |
| 96 | 59.32 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 99 | 59.33 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 22 |
| 115 | 59.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 122 | 59.37 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 21 | 22 |
| 124 | 59.37 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 145 | 59.40 | humidity | 70.0 | 43200 | > th | dose independent | no | NA | NA |
| 152 | 59.41 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 153 | 59.41 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 290 | 59.55 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 305 | 59.56 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 1 | 18 |
| 317 | 59.57 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 324 | 59.57 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 12 | 22 |
| 326 | 59.58 | humidity | 50.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 401 | 59.64 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 424 | 59.65 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 453 | 59.66 | humidity | 50.0 | 43200 | < th | dose dependent | no | NA | NA |
| 477 | 59.66 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 9 | 22 |
| 488 | 59.67 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 511 | 59.68 | humidity | 50.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 536 | 59.69 | humidity | 80.0 | 43200 | < th | dose dependent | sin | 2 | NA |
| 548 | 59.70 | humidity | 70.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 552 | 59.70 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 635 | 59.75 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 12 | 21 |
| 651 | 59.75 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 658 | 59.76 | humidity | 80.0 | 43200 | < th | dose dependent | no | NA | NA |
| 692 | 59.78 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 702 | 59.78 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 795 | 59.82 | humidity | 70.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 819 | 59.83 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 888 | 59.87 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 15 |